Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 NEK4P2-201ENST00000580004 1012 ntBASIC17.47■□□□□ 0.39
SGO1Q5FBB7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 AC141257.4-201ENST00000634557 245 ntBASIC17.47■□□□□ 0.39
SGO1Q5FBB7 AC136944.6-201ENST00000634818 245 ntBASIC17.47■□□□□ 0.39
SGO1Q5FBB7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SGO1Q5FBB7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.46■□□□□ 0.39
SGO1Q5FBB7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 GCSHP2-201ENST00000560971 527 ntBASIC17.46■□□□□ 0.39
SGO1Q5FBB7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SGO1Q5FBB7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SGO1Q5FBB7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
SGO1Q5FBB7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.46■□□□□ 0.38
SGO1Q5FBB7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
SGO1Q5FBB7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SGO1Q5FBB7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 AL023973.1-201ENST00000624619 620 ntBASIC17.45■□□□□ 0.38
SGO1Q5FBB7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms