Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.43■□□□□ 0.86
SREBF2Q12772 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SREBF2Q12772 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.43■□□□□ 0.86
SREBF2Q12772 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SREBF2Q12772 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SREBF2Q12772 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SREBF2Q12772 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SREBF2Q12772 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SREBF2Q12772 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SREBF2Q12772 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SREBF2Q12772 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SREBF2Q12772 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.42■□□□□ 0.86
SREBF2Q12772 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SREBF2Q12772 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SREBF2Q12772 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SREBF2Q12772 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.42■□□□□ 0.86
SREBF2Q12772 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.42■□□□□ 0.86
SREBF2Q12772 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.42■□□□□ 0.86
SREBF2Q12772 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.42■□□□□ 0.86
SREBF2Q12772 AL353135.1-201ENST00000606729 504 ntBASIC20.42■□□□□ 0.86
SREBF2Q12772 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.42■□□□□ 0.86
SREBF2Q12772 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.42■□□□□ 0.86
SREBF2Q12772 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SREBF2Q12772 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SREBF2Q12772 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SREBF2Q12772 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SREBF2Q12772 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 SIRPAP1-201ENST00000448467 1770 ntBASIC20.41■□□□□ 0.86
SREBF2Q12772 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SREBF2Q12772 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.41■□□□□ 0.86
SREBF2Q12772 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.41■□□□□ 0.86
SREBF2Q12772 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 GK-202ENST00000378941 458 ntTSL 3 BASIC20.41■□□□□ 0.86
SREBF2Q12772 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.41■□□□□ 0.86
SREBF2Q12772 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.41■□□□□ 0.86
SREBF2Q12772 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.41■□□□□ 0.86
SREBF2Q12772 AC093214.1-201ENST00000511688 1107 ntBASIC20.41■□□□□ 0.86
SREBF2Q12772 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 OR7E47P-204ENST00000575924 449 ntBASIC20.41■□□□□ 0.86
SREBF2Q12772 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.41■□□□□ 0.86
SREBF2Q12772 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.41■□□□□ 0.86
SREBF2Q12772 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
SREBF2Q12772 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SREBF2Q12772 AL158211.5-201ENST00000623583 2518 ntBASIC20.41■□□□□ 0.86
SREBF2Q12772 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SREBF2Q12772 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SREBF2Q12772 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SREBF2Q12772 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SREBF2Q12772 PTCHD3P3-201ENST00000403073 906 ntBASIC20.4■□□□□ 0.86
SREBF2Q12772 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SREBF2Q12772 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.4■□□□□ 0.86
SREBF2Q12772 AL157384.1-201ENST00000445995 2473 ntBASIC20.4■□□□□ 0.86
SREBF2Q12772 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.4■□□□□ 0.86
SREBF2Q12772 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SREBF2Q12772 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.4■□□□□ 0.86
SREBF2Q12772 INGX-202ENST00000489074 768 ntBASIC20.4■□□□□ 0.86
SREBF2Q12772 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.4■□□□□ 0.86
SREBF2Q12772 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SREBF2Q12772 AC087641.1-201ENST00000557561 1021 ntBASIC20.4■□□□□ 0.86
SREBF2Q12772 AC093520.2-201ENST00000561830 333 ntBASIC20.4■□□□□ 0.86
SREBF2Q12772 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SREBF2Q12772 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.4■□□□□ 0.86
SREBF2Q12772 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.4■□□□□ 0.86
SREBF2Q12772 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.4■□□□□ 0.86
SREBF2Q12772 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.4■□□□□ 0.86
SREBF2Q12772 AC012645.4-201ENST00000610691 1061 ntBASIC20.4■□□□□ 0.86
SREBF2Q12772 AL049757.1-201ENST00000616842 1596 ntBASIC20.4■□□□□ 0.86
SREBF2Q12772 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
SREBF2Q12772 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.4■□□□□ 0.86
SREBF2Q12772 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SREBF2Q12772 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SREBF2Q12772 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.39■□□□□ 0.86
SREBF2Q12772 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.39■□□□□ 0.86
SREBF2Q12772 AL499627.1-201ENST00000569373 2188 ntBASIC20.39■□□□□ 0.86
SREBF2Q12772 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SREBF2Q12772 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.39■□□□□ 0.86
SREBF2Q12772 GMCL1P1-201ENST00000463439 1581 ntBASIC20.39■□□□□ 0.85
SREBF2Q12772 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.39■□□□□ 0.85
SREBF2Q12772 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SREBF2Q12772 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.39■□□□□ 0.85
SREBF2Q12772 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SREBF2Q12772 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SREBF2Q12772 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.39■□□□□ 0.85
SREBF2Q12772 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.39■□□□□ 0.85
SREBF2Q12772 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SREBF2Q12772 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.39■□□□□ 0.85
SREBF2Q12772 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SREBF2Q12772 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SREBF2Q12772 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SREBF2Q12772 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms