Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD3P84022 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMAD3P84022 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMAD3P84022 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD3P84022 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 AC015922.1-201ENST00000421102 1152 ntBASIC19.29■□□□□ 0.68
SMAD3P84022 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SMAD3P84022 AC025678.2-201ENST00000562061 970 ntBASIC19.29■□□□□ 0.68
SMAD3P84022 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD3P84022 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.29■□□□□ 0.68
SMAD3P84022 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD3P84022 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD3P84022 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD3P84022 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.29■□□□□ 0.68
SMAD3P84022 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD3P84022 AC009102.3-201ENST00000623118 1491 ntBASIC19.28■□□□□ 0.68
SMAD3P84022 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD3P84022 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.28■□□□□ 0.68
SMAD3P84022 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMAD3P84022 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SMAD3P84022 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.28■□□□□ 0.68
SMAD3P84022 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD3P84022 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD3P84022 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
SMAD3P84022 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SMAD3P84022 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.28■□□□□ 0.68
SMAD3P84022 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD3P84022 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.28■□□□□ 0.68
SMAD3P84022 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.28■□□□□ 0.68
SMAD3P84022 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SMAD3P84022 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD3P84022 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SMAD3P84022 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.28■□□□□ 0.68
SMAD3P84022 AC004835.2-201ENST00000603762 682 ntBASIC19.28■□□□□ 0.68
SMAD3P84022 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
SMAD3P84022 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMAD3P84022 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMAD3P84022 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD3P84022 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SMAD3P84022 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD3P84022 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD3P84022 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SMAD3P84022 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMAD3P84022 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD3P84022 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD3P84022 PMPCAP1-201ENST00000508114 1576 ntBASIC19.27■□□□□ 0.68
SMAD3P84022 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SMAD3P84022 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.27■□□□□ 0.68
SMAD3P84022 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
SMAD3P84022 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.27■□□□□ 0.68
SMAD3P84022 AC108073.2-201ENST00000464002 357 ntBASIC19.27■□□□□ 0.68
SMAD3P84022 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.27■□□□□ 0.68
SMAD3P84022 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD3P84022 AC069262.1-201ENST00000539058 672 ntBASIC19.27■□□□□ 0.68
SMAD3P84022 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD3P84022 PDPK2P-202ENST00000562415 1191 ntBASIC19.27■□□□□ 0.68
SMAD3P84022 AL589182.2-201ENST00000619332 1049 ntBASIC19.27■□□□□ 0.68
SMAD3P84022 AJ011932.1-201ENST00000621707 465 ntBASIC19.27■□□□□ 0.68
SMAD3P84022 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD3P84022 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.27■□□□□ 0.68
SMAD3P84022 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD3P84022 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.27■□□□□ 0.68
SMAD3P84022 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD3P84022 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD3P84022 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.27■□□□□ 0.67
SMAD3P84022 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.26■□□□□ 0.67
SMAD3P84022 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.26■□□□□ 0.67
SMAD3P84022 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 KRT18P65-201ENST00000439811 1286 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms