Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.11■□□□□ 0.33
PHC1P78364 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PHC1P78364 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
PHC1P78364 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PHC1P78364 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PHC1P78364 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.11■□□□□ 0.33
PHC1P78364 LINC00167-201ENST00000530583 1419 ntBASIC17.11■□□□□ 0.33
PHC1P78364 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.11■□□□□ 0.33
PHC1P78364 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PHC1P78364 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHC1P78364 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 PCDHA12-202ENST00000613593 2588 ntBASIC17.1■□□□□ 0.33
PHC1P78364 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PHC1P78364 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 ECEL1P2-202ENST00000465689 757 ntBASIC17.1■□□□□ 0.33
PHC1P78364 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.1■□□□□ 0.33
PHC1P78364 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PHC1P78364 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 MIR4497-201ENST00000583208 89 ntBASIC17.1■□□□□ 0.33
PHC1P78364 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.1■□□□□ 0.33
PHC1P78364 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.1■□□□□ 0.33
PHC1P78364 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
PHC1P78364 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHC1P78364 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.09■□□□□ 0.33
PHC1P78364 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.09■□□□□ 0.33
PHC1P78364 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.09■□□□□ 0.33
PHC1P78364 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.09■□□□□ 0.33
PHC1P78364 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.09■□□□□ 0.33
PHC1P78364 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PHC1P78364 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.09■□□□□ 0.33
PHC1P78364 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.09■□□□□ 0.33
PHC1P78364 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
PHC1P78364 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PHC1P78364 MIR3917-201ENST00000580971 93 ntBASIC17.09■□□□□ 0.33
PHC1P78364 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.09■□□□□ 0.33
PHC1P78364 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.09■□□□□ 0.33
PHC1P78364 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PHC1P78364 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.09■□□□□ 0.33
PHC1P78364 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PHC1P78364 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.09■□□□□ 0.33
PHC1P78364 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PHC1P78364 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.09■□□□□ 0.33
PHC1P78364 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.09■□□□□ 0.33
PHC1P78364 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.09■□□□□ 0.33
PHC1P78364 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHC1P78364 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms