Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERVFC1P60507 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.8■□□□□ 0.6
ERVFC1P60507 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERVFC1P60507 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERVFC1P60507 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ERVFC1P60507 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERVFC1P60507 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERVFC1P60507 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERVFC1P60507 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.79■□□□□ 0.6
ERVFC1P60507 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ERVFC1P60507 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.79■□□□□ 0.6
ERVFC1P60507 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 AC126763.1-201ENST00000552015 2118 ntBASIC18.79■□□□□ 0.6
ERVFC1P60507 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ERVFC1P60507 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ERVFC1P60507 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ERVFC1P60507 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.79■□□□□ 0.6
ERVFC1P60507 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.79■□□□□ 0.6
ERVFC1P60507 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.79■□□□□ 0.6
ERVFC1P60507 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.79■□□□□ 0.6
ERVFC1P60507 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
ERVFC1P60507 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.79■□□□□ 0.6
ERVFC1P60507 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.79■□□□□ 0.6
ERVFC1P60507 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
ERVFC1P60507 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.79■□□□□ 0.6
ERVFC1P60507 AC002310.6-201ENST00000624451 1377 ntBASIC18.79■□□□□ 0.6
ERVFC1P60507 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERVFC1P60507 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.78■□□□□ 0.6
ERVFC1P60507 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERVFC1P60507 PHGDH-209ENST00000641074 1780 ntBASIC18.78■□□□□ 0.6
ERVFC1P60507 AC148477.5-201ENST00000625164 1645 ntBASIC18.78■□□□□ 0.6
ERVFC1P60507 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.78■□□□□ 0.6
ERVFC1P60507 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERVFC1P60507 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERVFC1P60507 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERVFC1P60507 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERVFC1P60507 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERVFC1P60507 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
ERVFC1P60507 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ERVFC1P60507 HTR5BP-201ENST00000430851 1154 ntBASIC18.78■□□□□ 0.6
ERVFC1P60507 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.78■□□□□ 0.6
ERVFC1P60507 AC108073.2-201ENST00000464002 357 ntBASIC18.78■□□□□ 0.6
ERVFC1P60507 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.78■□□□□ 0.6
ERVFC1P60507 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERVFC1P60507 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.78■□□□□ 0.6
ERVFC1P60507 SNHG9-202ENST00000564014 471 ntBASIC18.78■□□□□ 0.6
ERVFC1P60507 AL513190.1-201ENST00000621254 727 ntBASIC18.78■□□□□ 0.6
ERVFC1P60507 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.78■□□□□ 0.6
ERVFC1P60507 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ERVFC1P60507 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.78■□□□□ 0.6
ERVFC1P60507 AC132938.5-201ENST00000624980 1813 ntBASIC18.78■□□□□ 0.6
ERVFC1P60507 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.78■□□□□ 0.6
ERVFC1P60507 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
ERVFC1P60507 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERVFC1P60507 AC093010.1-201ENST00000473625 1624 ntBASIC18.78■□□□□ 0.6
ERVFC1P60507 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.78■□□□□ 0.6
ERVFC1P60507 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ERVFC1P60507 AL353593.2-201ENST00000602529 1483 ntBASIC18.77■□□□□ 0.6
ERVFC1P60507 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERVFC1P60507 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.77■□□□□ 0.6
ERVFC1P60507 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERVFC1P60507 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERVFC1P60507 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERVFC1P60507 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.77■□□□□ 0.6
ERVFC1P60507 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERVFC1P60507 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERVFC1P60507 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.77■□□□□ 0.6
ERVFC1P60507 VN2R19P-201ENST00000442399 1052 ntBASIC18.77■□□□□ 0.6
ERVFC1P60507 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.77■□□□□ 0.6
ERVFC1P60507 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.77■□□□□ 0.6
ERVFC1P60507 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.77■□□□□ 0.6
ERVFC1P60507 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.77■□□□□ 0.6
ERVFC1P60507 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.77■□□□□ 0.6
ERVFC1P60507 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.77■□□□□ 0.6
ERVFC1P60507 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
ERVFC1P60507 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.77■□□□□ 0.6
ERVFC1P60507 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERVFC1P60507 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERVFC1P60507 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ERVFC1P60507 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ERVFC1P60507 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERVFC1P60507 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.76■□□□□ 0.59
ERVFC1P60507 AL049757.1-201ENST00000616842 1596 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms