Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S2P56377 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S2P56377 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S2P56377 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S2P56377 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S2P56377 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S2P56377 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
AP1S2P56377 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S2P56377 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.48■□□□□ 0.39
AP1S2P56377 SPDYE13P-201ENST00000445314 798 ntBASIC17.48■□□□□ 0.39
AP1S2P56377 FAM210CP-201ENST00000445714 574 ntBASIC17.48■□□□□ 0.39
AP1S2P56377 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 KRT18P21-201ENST00000515767 1272 ntBASIC17.48■□□□□ 0.39
AP1S2P56377 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.48■□□□□ 0.39
AP1S2P56377 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
AP1S2P56377 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.48■□□□□ 0.39
AP1S2P56377 AC005332.3-201ENST00000589904 676 ntBASIC17.48■□□□□ 0.39
AP1S2P56377 AL390719.2-201ENST00000606993 987 ntBASIC17.48■□□□□ 0.39
AP1S2P56377 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.48■□□□□ 0.39
AP1S2P56377 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AP1S2P56377 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
AP1S2P56377 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.48■□□□□ 0.39
AP1S2P56377 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.48■□□□□ 0.39
AP1S2P56377 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.48■□□□□ 0.39
AP1S2P56377 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
AP1S2P56377 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP1S2P56377 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S2P56377 AC100803.2-201ENST00000562459 1963 ntBASIC17.48■□□□□ 0.39
AP1S2P56377 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.47■□□□□ 0.39
AP1S2P56377 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
AP1S2P56377 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S2P56377 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
AP1S2P56377 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S2P56377 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S2P56377 AC067852.2-201ENST00000590513 2313 ntBASIC17.47■□□□□ 0.39
AP1S2P56377 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.47■□□□□ 0.39
AP1S2P56377 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S2P56377 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S2P56377 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.47■□□□□ 0.39
AP1S2P56377 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S2P56377 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.47■□□□□ 0.39
AP1S2P56377 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
AP1S2P56377 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
AP1S2P56377 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.47■□□□□ 0.39
AP1S2P56377 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.47■□□□□ 0.39
AP1S2P56377 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
AP1S2P56377 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S2P56377 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP1S2P56377 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.46■□□□□ 0.39
AP1S2P56377 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP1S2P56377 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.46■□□□□ 0.39
AP1S2P56377 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.46■□□□□ 0.39
AP1S2P56377 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S2P56377 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.46■□□□□ 0.39
AP1S2P56377 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S2P56377 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP1S2P56377 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP1S2P56377 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.46■□□□□ 0.39
AP1S2P56377 AL645929.1-201ENST00000420084 975 ntBASIC17.46■□□□□ 0.39
AP1S2P56377 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.46■□□□□ 0.39
AP1S2P56377 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.46■□□□□ 0.39
AP1S2P56377 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.46■□□□□ 0.39
AP1S2P56377 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S2P56377 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S2P56377 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S2P56377 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP1S2P56377 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms