Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 BNIP3P18-201ENST00000593976 575 ntBASIC19■□□□□ 0.63
CACNA2D1P54289 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19■□□□□ 0.63
CACNA2D1P54289 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19■□□□□ 0.63
CACNA2D1P54289 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CACNA2D1P54289 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19■□□□□ 0.63
CACNA2D1P54289 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CACNA2D1P54289 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CACNA2D1P54289 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CACNA2D1P54289 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19■□□□□ 0.63
CACNA2D1P54289 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA2D1P54289 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA2D1P54289 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA2D1P54289 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA2D1P54289 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA2D1P54289 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA2D1P54289 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA2D1P54289 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA2D1P54289 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA2D1P54289 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA2D1P54289 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 REXO1L9P-201ENST00000604264 2108 ntBASIC18.98■□□□□ 0.63
CACNA2D1P54289 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 AC112698.1-201ENST00000510299 916 ntBASIC18.98■□□□□ 0.63
CACNA2D1P54289 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA2D1P54289 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CACNA2D1P54289 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.97■□□□□ 0.63
CACNA2D1P54289 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 VENTXP7-201ENST00000475503 772 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms