Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
CLTCL1P53675 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
CLTCL1P53675 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC25.5■■□□□ 1.67
CLTCL1P53675 AC004967.1-201ENST00000453589 447 ntBASIC25.5■■□□□ 1.67
CLTCL1P53675 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC25.5■■□□□ 1.67
CLTCL1P53675 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC25.5■■□□□ 1.67
CLTCL1P53675 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CLTCL1P53675 AP001160.2-201ENST00000596071 487 ntBASIC25.5■■□□□ 1.67
CLTCL1P53675 HARS-201ENST00000307633 1780 ntTSL 2 BASIC25.5■■□□□ 1.67
CLTCL1P53675 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CLTCL1P53675 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CLTCL1P53675 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CLTCL1P53675 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CLTCL1P53675 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CLTCL1P53675 AC002310.6-201ENST00000624451 1377 ntBASIC25.49■■□□□ 1.67
CLTCL1P53675 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
CLTCL1P53675 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CLTCL1P53675 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC25.49■■□□□ 1.67
CLTCL1P53675 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
CLTCL1P53675 DNAJB3-201ENST00000446806 729 ntBASIC25.49■■□□□ 1.67
CLTCL1P53675 URGCP-206ENST00000446958 365 ntTSL 2 BASIC25.49■■□□□ 1.67
CLTCL1P53675 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC25.49■■□□□ 1.67
CLTCL1P53675 COX5A-202ENST00000562233 441 ntTSL 3 BASIC25.49■■□□□ 1.67
CLTCL1P53675 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC25.49■■□□□ 1.67
CLTCL1P53675 AC109462.3-201ENST00000573934 613 ntBASIC25.49■■□□□ 1.67
CLTCL1P53675 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC25.49■■□□□ 1.67
CLTCL1P53675 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC25.49■■□□□ 1.67
CLTCL1P53675 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC25.49■■□□□ 1.67
CLTCL1P53675 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLTCL1P53675 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLTCL1P53675 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC25.49■■□□□ 1.67
CLTCL1P53675 AC135776.1-201ENST00000319817 2481 ntBASIC25.49■■□□□ 1.67
CLTCL1P53675 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CLTCL1P53675 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC25.49■■□□□ 1.67
CLTCL1P53675 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLTCL1P53675 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLTCL1P53675 AC018445.3-201ENST00000624177 1945 ntBASIC25.49■■□□□ 1.67
CLTCL1P53675 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 IGLL3P-201ENST00000412472 434 ntBASIC25.48■■□□□ 1.67
CLTCL1P53675 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 NKTR-203ENST00000442970 646 ntTSL 2 BASIC25.48■■□□□ 1.67
CLTCL1P53675 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
CLTCL1P53675 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC25.48■■□□□ 1.67
CLTCL1P53675 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC25.48■■□□□ 1.67
CLTCL1P53675 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC25.48■■□□□ 1.67
CLTCL1P53675 AC018845.2-201ENST00000568326 409 ntBASIC25.48■■□□□ 1.67
CLTCL1P53675 AC005593.1-201ENST00000624894 515 ntBASIC25.48■■□□□ 1.67
CLTCL1P53675 AC093503.3-201ENST00000624917 2352 ntBASIC25.48■■□□□ 1.67
CLTCL1P53675 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CLTCL1P53675 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC25.48■■□□□ 1.67
CLTCL1P53675 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CLTCL1P53675 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC25.48■■□□□ 1.67
CLTCL1P53675 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC25.48■■□□□ 1.67
CLTCL1P53675 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLTCL1P53675 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CLTCL1P53675 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC25.48■■□□□ 1.67
CLTCL1P53675 STK25P1-201ENST00000585406 838 ntBASIC25.48■■□□□ 1.67
CLTCL1P53675 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC25.48■■□□□ 1.67
CLTCL1P53675 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC25.48■■□□□ 1.67
CLTCL1P53675 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CLTCL1P53675 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CLTCL1P53675 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
CLTCL1P53675 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CLTCL1P53675 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC25.47■■□□□ 1.67
CLTCL1P53675 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC25.47■■□□□ 1.67
CLTCL1P53675 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC25.47■■□□□ 1.67
CLTCL1P53675 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.47■■□□□ 1.67
CLTCL1P53675 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
CLTCL1P53675 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
CLTCL1P53675 AC008667.4-201ENST00000607370 168 ntBASIC25.47■■□□□ 1.67
CLTCL1P53675 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CLTCL1P53675 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLTCL1P53675 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CLTCL1P53675 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CLTCL1P53675 AC009336.1-201ENST00000608941 1553 ntBASIC25.46■■□□□ 1.67
CLTCL1P53675 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC25.46■■□□□ 1.67
CLTCL1P53675 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLTCL1P53675 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC25.46■■□□□ 1.67
CLTCL1P53675 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CLTCL1P53675 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC25.46■■□□□ 1.67
CLTCL1P53675 RPS15P9-201ENST00000494093 319 ntBASIC25.46■■□□□ 1.67
CLTCL1P53675 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC25.46■■□□□ 1.67
CLTCL1P53675 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC25.46■■□□□ 1.67
CLTCL1P53675 BX276092.7-203ENST00000637198 1536 ntBASIC25.46■■□□□ 1.67
CLTCL1P53675 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC25.46■■□□□ 1.67
CLTCL1P53675 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
CLTCL1P53675 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLTCL1P53675 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
CLTCL1P53675 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
CLTCL1P53675 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CLTCL1P53675 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms