Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 KRT8P50-201ENST00000562022 1438 ntBASIC14.2□□□□□ -0.14
CDC34P49427 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CDC34P49427 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 AC034236.2-201ENST00000606662 1610 ntBASIC14.19□□□□□ -0.14
CDC34P49427 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.19□□□□□ -0.14
CDC34P49427 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.19□□□□□ -0.14
CDC34P49427 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CDC34P49427 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.19□□□□□ -0.14
CDC34P49427 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.19□□□□□ -0.14
CDC34P49427 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC34P49427 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDC34P49427 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.19□□□□□ -0.14
CDC34P49427 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.19□□□□□ -0.14
CDC34P49427 AC131212.4-201ENST00000623606 975 ntBASIC14.19□□□□□ -0.14
CDC34P49427 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.19□□□□□ -0.14
CDC34P49427 MYC-209ENST00000641252 345 ntBASIC14.19□□□□□ -0.14
CDC34P49427 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDC34P49427 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC34P49427 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC34P49427 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDC34P49427 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.19□□□□□ -0.14
CDC34P49427 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC34P49427 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDC34P49427 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.19□□□□□ -0.14
CDC34P49427 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC34P49427 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 AC009102.3-201ENST00000623118 1491 ntBASIC14.18□□□□□ -0.14
CDC34P49427 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDC34P49427 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDC34P49427 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC34P49427 MIR564-202ENST00000385049 94 ntBASIC14.18□□□□□ -0.14
CDC34P49427 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC34P49427 MIR4758-201ENST00000577688 71 ntBASIC14.18□□□□□ -0.14
CDC34P49427 AC080038.1-201ENST00000611274 1154 ntBASIC14.18□□□□□ -0.14
CDC34P49427 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC34P49427 AC099343.3-201ENST00000605834 2503 ntBASIC14.18□□□□□ -0.14
CDC34P49427 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
CDC34P49427 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC34P49427 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.18□□□□□ -0.14
CDC34P49427 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC34P49427 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDC34P49427 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDC34P49427 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms