Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.6■□□□□ 0.25
HTR3AP46098 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HTR3AP46098 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTR3AP46098 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HTR3AP46098 AL391005.1-201ENST00000623953 2435 ntBASIC16.59■□□□□ 0.25
HTR3AP46098 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR3AP46098 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HTR3AP46098 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HTR3AP46098 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HTR3AP46098 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HTR3AP46098 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR3AP46098 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HTR3AP46098 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
HTR3AP46098 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.59■□□□□ 0.25
HTR3AP46098 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HTR3AP46098 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HTR3AP46098 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 AC135776.1-201ENST00000319817 2481 ntBASIC16.59■□□□□ 0.25
HTR3AP46098 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HTR3AP46098 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.59■□□□□ 0.25
HTR3AP46098 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HTR3AP46098 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HTR3AP46098 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR3AP46098 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR3AP46098 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR3AP46098 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR3AP46098 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR3AP46098 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.58■□□□□ 0.25
HTR3AP46098 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HTR3AP46098 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR3AP46098 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HTR3AP46098 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR3AP46098 AL157888.1-201ENST00000631930 593 ntBASIC16.58■□□□□ 0.24
HTR3AP46098 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR3AP46098 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
HTR3AP46098 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR3AP46098 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HTR3AP46098 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR3AP46098 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.58■□□□□ 0.24
HTR3AP46098 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.58■□□□□ 0.24
HTR3AP46098 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
HTR3AP46098 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HTR3AP46098 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HTR3AP46098 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.57■□□□□ 0.24
HTR3AP46098 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HTR3AP46098 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 AL645608.8-201ENST00000606034 2086 ntBASIC16.57■□□□□ 0.24
HTR3AP46098 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.57■□□□□ 0.24
HTR3AP46098 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.57■□□□□ 0.24
HTR3AP46098 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.57■□□□□ 0.24
HTR3AP46098 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HTR3AP46098 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 OR6D1P-202ENST00000641007 5290 ntBASIC16.57■□□□□ 0.24
HTR3AP46098 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HTR3AP46098 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.57■□□□□ 0.24
HTR3AP46098 HOMER2P1-201ENST00000455653 964 ntBASIC16.57■□□□□ 0.24
HTR3AP46098 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HTR3AP46098 RASA4DP-201ENST00000460726 1199 ntBASIC16.57■□□□□ 0.24
HTR3AP46098 YBX1P2-201ENST00000489612 999 ntBASIC16.57■□□□□ 0.24
HTR3AP46098 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HTR3AP46098 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.57■□□□□ 0.24
HTR3AP46098 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.57■□□□□ 0.24
HTR3AP46098 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms