Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPHP41219 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PRPHP41219 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPHP41219 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPHP41219 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRPHP41219 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.27■□□□□ 0.84
PRPHP41219 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRPHP41219 FAM86EP-206ENST00000510506 987 ntBASIC20.27■□□□□ 0.84
PRPHP41219 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.27■□□□□ 0.84
PRPHP41219 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.27■□□□□ 0.84
PRPHP41219 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.27■□□□□ 0.84
PRPHP41219 AC116407.2-201ENST00000613639 860 ntBASIC20.27■□□□□ 0.84
PRPHP41219 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.27■□□□□ 0.84
PRPHP41219 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.27■□□□□ 0.84
PRPHP41219 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.27■□□□□ 0.84
PRPHP41219 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRPHP41219 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PRPHP41219 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PRPHP41219 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.26■□□□□ 0.83
PRPHP41219 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.26■□□□□ 0.83
PRPHP41219 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PRPHP41219 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.26■□□□□ 0.83
PRPHP41219 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PRPHP41219 MTCL1P1-201ENST00000446207 792 ntBASIC20.26■□□□□ 0.83
PRPHP41219 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.26■□□□□ 0.83
PRPHP41219 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.26■□□□□ 0.83
PRPHP41219 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.26■□□□□ 0.83
PRPHP41219 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PRPHP41219 AC011498.5-201ENST00000592027 486 ntBASIC20.26■□□□□ 0.83
PRPHP41219 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
PRPHP41219 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PRPHP41219 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PRPHP41219 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PRPHP41219 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.26■□□□□ 0.83
PRPHP41219 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRPHP41219 AC005332.1-201ENST00000577698 1310 ntBASIC20.26■□□□□ 0.83
PRPHP41219 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PRPHP41219 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.25■□□□□ 0.83
PRPHP41219 TSPY22P-201ENST00000427496 604 ntBASIC20.25■□□□□ 0.83
PRPHP41219 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.25■□□□□ 0.83
PRPHP41219 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.25■□□□□ 0.83
PRPHP41219 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.25■□□□□ 0.83
PRPHP41219 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.25■□□□□ 0.83
PRPHP41219 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.25■□□□□ 0.83
PRPHP41219 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRPHP41219 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 AC012317.2-201ENST00000623305 2251 ntBASIC20.24■□□□□ 0.83
PRPHP41219 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.24■□□□□ 0.83
PRPHP41219 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PRPHP41219 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PRPHP41219 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PRPHP41219 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.24■□□□□ 0.83
PRPHP41219 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.24■□□□□ 0.83
PRPHP41219 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.24■□□□□ 0.83
PRPHP41219 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.24■□□□□ 0.83
PRPHP41219 DDX43P3-201ENST00000441064 443 ntBASIC20.24■□□□□ 0.83
PRPHP41219 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.24■□□□□ 0.83
PRPHP41219 RN7SL606P-201ENST00000472779 293 ntBASIC20.24■□□□□ 0.83
PRPHP41219 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PRPHP41219 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PRPHP41219 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PRPHP41219 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.24■□□□□ 0.83
PRPHP41219 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRPHP41219 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.24■□□□□ 0.83
PRPHP41219 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRPHP41219 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.23■□□□□ 0.83
PRPHP41219 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms