Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.62■■□□□ 1.21
COL15A1P39059 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL15A1P39059 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.62■■□□□ 1.21
COL15A1P39059 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL15A1P39059 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
COL15A1P39059 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.62■■□□□ 1.21
COL15A1P39059 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.62■■□□□ 1.21
COL15A1P39059 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL15A1P39059 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL15A1P39059 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.62■■□□□ 1.21
COL15A1P39059 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
COL15A1P39059 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
COL15A1P39059 DNAJB3-202ENST00000449667 1266 ntBASIC22.62■■□□□ 1.21
COL15A1P39059 AC136632.2-201ENST00000512891 861 ntBASIC22.62■■□□□ 1.21
COL15A1P39059 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL15A1P39059 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.62■■□□□ 1.21
COL15A1P39059 AC027796.2-201ENST00000575326 344 ntBASIC22.62■■□□□ 1.21
COL15A1P39059 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
COL15A1P39059 AC005593.1-201ENST00000624894 515 ntBASIC22.62■■□□□ 1.21
COL15A1P39059 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
COL15A1P39059 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL15A1P39059 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL15A1P39059 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
COL15A1P39059 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.61■■□□□ 1.21
COL15A1P39059 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.61■■□□□ 1.21
COL15A1P39059 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
COL15A1P39059 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC22.61■■□□□ 1.21
COL15A1P39059 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL15A1P39059 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.61■■□□□ 1.21
COL15A1P39059 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.61■■□□□ 1.21
COL15A1P39059 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.61■■□□□ 1.21
COL15A1P39059 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.61■■□□□ 1.21
COL15A1P39059 PGM5P2-202ENST00000637225 1043 ntBASIC22.61■■□□□ 1.21
COL15A1P39059 AC079781.4-201ENST00000641908 219 ntBASIC22.61■■□□□ 1.21
COL15A1P39059 AC004408.2-201ENST00000623613 2777 ntBASIC22.61■■□□□ 1.21
COL15A1P39059 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
COL15A1P39059 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL15A1P39059 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL15A1P39059 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.6■■□□□ 1.21
COL15A1P39059 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL15A1P39059 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.6■■□□□ 1.21
COL15A1P39059 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL15A1P39059 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
COL15A1P39059 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
COL15A1P39059 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
COL15A1P39059 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL15A1P39059 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL15A1P39059 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL15A1P39059 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
COL15A1P39059 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL15A1P39059 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL15A1P39059 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.6■■□□□ 1.21
COL15A1P39059 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
COL15A1P39059 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.6■■□□□ 1.21
COL15A1P39059 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
COL15A1P39059 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC22.6■■□□□ 1.21
COL15A1P39059 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL15A1P39059 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.59■■□□□ 1.21
COL15A1P39059 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.59■■□□□ 1.21
COL15A1P39059 PHGDH-209ENST00000641074 1780 ntBASIC22.59■■□□□ 1.21
COL15A1P39059 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.59■■□□□ 1.21
COL15A1P39059 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
COL15A1P39059 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.59■■□□□ 1.21
COL15A1P39059 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.59■■□□□ 1.21
COL15A1P39059 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
COL15A1P39059 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.59■■□□□ 1.21
COL15A1P39059 ELK2BP-201ENST00000415014 1224 ntBASIC22.59■■□□□ 1.21
COL15A1P39059 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC22.59■■□□□ 1.21
COL15A1P39059 AP006288.1-201ENST00000446065 395 ntBASIC22.59■■□□□ 1.21
COL15A1P39059 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.59■■□□□ 1.21
COL15A1P39059 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.59■■□□□ 1.21
COL15A1P39059 MTDHP5-201ENST00000598980 586 ntBASIC22.59■■□□□ 1.21
COL15A1P39059 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.59■■□□□ 1.21
COL15A1P39059 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.59■■□□□ 1.21
COL15A1P39059 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
COL15A1P39059 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms