Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.16■□□□□ 0.5
RPA3P35244 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RPA3P35244 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.16■□□□□ 0.5
RPA3P35244 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RPA3P35244 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RPA3P35244 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
RPA3P35244 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RPA3P35244 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.16■□□□□ 0.5
RPA3P35244 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
RPA3P35244 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RPA3P35244 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.16■□□□□ 0.5
RPA3P35244 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.16■□□□□ 0.5
RPA3P35244 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
RPA3P35244 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPA3P35244 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 AL163051.1-201ENST00000569214 1512 ntBASIC18.15■□□□□ 0.5
RPA3P35244 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 AC211429.1-201ENST00000415277 523 ntBASIC18.15■□□□□ 0.5
RPA3P35244 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.15■□□□□ 0.5
RPA3P35244 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RPA3P35244 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RPA3P35244 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
RPA3P35244 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.15■□□□□ 0.5
RPA3P35244 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPA3P35244 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RPA3P35244 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RPA3P35244 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.15■□□□□ 0.5
RPA3P35244 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RPA3P35244 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RPA3P35244 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.14■□□□□ 0.49
RPA3P35244 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.14■□□□□ 0.49
RPA3P35244 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RPA3P35244 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.14■□□□□ 0.49
RPA3P35244 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.14■□□□□ 0.49
RPA3P35244 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
RPA3P35244 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.14■□□□□ 0.49
RPA3P35244 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.14■□□□□ 0.49
RPA3P35244 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPA3P35244 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RPA3P35244 AC009102.3-201ENST00000623118 1491 ntBASIC18.14■□□□□ 0.49
RPA3P35244 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RPA3P35244 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RPA3P35244 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.13■□□□□ 0.49
RPA3P35244 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.13■□□□□ 0.49
RPA3P35244 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.13■□□□□ 0.49
RPA3P35244 HMGA1P5-201ENST00000412453 271 ntBASIC18.13■□□□□ 0.49
RPA3P35244 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.13■□□□□ 0.49
RPA3P35244 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.13■□□□□ 0.49
RPA3P35244 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.13■□□□□ 0.49
RPA3P35244 MIR4674-201ENST00000582457 87 ntBASIC18.13■□□□□ 0.49
RPA3P35244 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.13■□□□□ 0.49
RPA3P35244 LINC01023-201ENST00000606054 436 ntBASIC18.13■□□□□ 0.49
RPA3P35244 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPA3P35244 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RPA3P35244 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RPA3P35244 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.13■□□□□ 0.49
RPA3P35244 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms