Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL590326.2-201ENST00000625139 305 ntBASIC17.04■□□□□ 0.32
PTPN6P29350 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN6P29350 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN6P29350 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTPN6P29350 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PTPN6P29350 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTPN6P29350 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN6P29350 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTPN6P29350 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTPN6P29350 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PTPN6P29350 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN6P29350 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN6P29350 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTPN6P29350 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN6P29350 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 TSPY5P-201ENST00000426936 936 ntBASIC17.03■□□□□ 0.32
PTPN6P29350 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTPN6P29350 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 AC063952.2-201ENST00000498792 1227 ntBASIC17.03■□□□□ 0.32
PTPN6P29350 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN6P29350 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN6P29350 AL441883.1-201ENST00000566170 1045 ntBASIC17.03■□□□□ 0.32
PTPN6P29350 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN6P29350 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN6P29350 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN6P29350 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN6P29350 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 PCDHA12-202ENST00000613593 2588 ntBASIC17.03■□□□□ 0.32
PTPN6P29350 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTPN6P29350 LINC00167-201ENST00000530583 1419 ntBASIC17.03■□□□□ 0.32
PTPN6P29350 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN6P29350 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN6P29350 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PTPN6P29350 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN6P29350 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN6P29350 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN6P29350 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN6P29350 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN6P29350 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
PTPN6P29350 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
PTPN6P29350 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN6P29350 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN6P29350 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN6P29350 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN6P29350 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN6P29350 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN6P29350 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN6P29350 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN6P29350 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.02■□□□□ 0.32
PTPN6P29350 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN6P29350 AC022616.7-201ENST00000525383 220 ntBASIC17.02■□□□□ 0.32
PTPN6P29350 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN6P29350 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN6P29350 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PTPN6P29350 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PTPN6P29350 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN6P29350 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN6P29350 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN6P29350 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN6P29350 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN6P29350 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.02■□□□□ 0.31
PTPN6P29350 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN6P29350 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN6P29350 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN6P29350 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN6P29350 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTPN6P29350 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTPN6P29350 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN6P29350 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN6P29350 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN6P29350 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN6P29350 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.01■□□□□ 0.31
PTPN6P29350 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN6P29350 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms