Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.42■□□□□ 0.7
SYN1P17600 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYN1P17600 AL020989.1-201ENST00000422979 469 ntBASIC19.42■□□□□ 0.7
SYN1P17600 HLA-V-201ENST00000429037 534 ntBASIC19.42■□□□□ 0.7
SYN1P17600 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.42■□□□□ 0.7
SYN1P17600 GAPDHP21-201ENST00000450301 1010 ntBASIC19.42■□□□□ 0.7
SYN1P17600 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SYN1P17600 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.42■□□□□ 0.7
SYN1P17600 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SYN1P17600 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
SYN1P17600 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.42■□□□□ 0.7
SYN1P17600 RN7SL204P-201ENST00000582831 262 ntBASIC19.42■□□□□ 0.7
SYN1P17600 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SYN1P17600 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYN1P17600 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYN1P17600 AC125437.2-201ENST00000625180 2167 ntBASIC19.42■□□□□ 0.7
SYN1P17600 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SYN1P17600 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYN1P17600 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYN1P17600 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.41■□□□□ 0.7
SYN1P17600 AC148477.5-201ENST00000625164 1645 ntBASIC19.41■□□□□ 0.7
SYN1P17600 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.41■□□□□ 0.7
SYN1P17600 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SYN1P17600 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYN1P17600 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYN1P17600 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYN1P17600 MIR661-201ENST00000384842 89 ntBASIC19.41■□□□□ 0.7
SYN1P17600 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.41■□□□□ 0.7
SYN1P17600 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SYN1P17600 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.41■□□□□ 0.7
SYN1P17600 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.41■□□□□ 0.7
SYN1P17600 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYN1P17600 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYN1P17600 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SYN1P17600 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYN1P17600 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SYN1P17600 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.41■□□□□ 0.7
SYN1P17600 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SYN1P17600 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.41■□□□□ 0.7
SYN1P17600 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYN1P17600 NCF1C-201ENST00000438382 1427 ntBASIC19.41■□□□□ 0.7
SYN1P17600 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.41■□□□□ 0.7
SYN1P17600 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SYN1P17600 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYN1P17600 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.4■□□□□ 0.7
SYN1P17600 RHOQP3-201ENST00000437982 621 ntBASIC19.4■□□□□ 0.7
SYN1P17600 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.4■□□□□ 0.7
SYN1P17600 TSPY16P-201ENST00000449843 468 ntBASIC19.4■□□□□ 0.7
SYN1P17600 MEIS3P1-201ENST00000495167 958 ntBASIC19.4■□□□□ 0.7
SYN1P17600 AC122714.2-201ENST00000502787 707 ntBASIC19.4■□□□□ 0.7
SYN1P17600 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.4■□□□□ 0.7
SYN1P17600 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.4■□□□□ 0.7
SYN1P17600 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYN1P17600 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYN1P17600 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYN1P17600 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.4■□□□□ 0.7
SYN1P17600 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.4■□□□□ 0.7
SYN1P17600 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYN1P17600 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.4■□□□□ 0.7
SYN1P17600 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.4■□□□□ 0.7
SYN1P17600 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SYN1P17600 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SYN1P17600 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.39■□□□□ 0.7
SYN1P17600 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
SYN1P17600 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.39■□□□□ 0.7
SYN1P17600 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SYN1P17600 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.39■□□□□ 0.69
SYN1P17600 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SYN1P17600 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
SYN1P17600 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.39■□□□□ 0.69
SYN1P17600 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.39■□□□□ 0.69
SYN1P17600 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.39■□□□□ 0.69
SYN1P17600 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.39■□□□□ 0.69
SYN1P17600 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.39■□□□□ 0.69
SYN1P17600 SIGLEC30P-201ENST00000455569 941 ntBASIC19.39■□□□□ 0.69
SYN1P17600 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.39■□□□□ 0.69
SYN1P17600 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.39■□□□□ 0.69
SYN1P17600 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.39■□□□□ 0.69
SYN1P17600 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.39■□□□□ 0.69
SYN1P17600 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.39■□□□□ 0.69
SYN1P17600 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SYN1P17600 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.39■□□□□ 0.69
SYN1P17600 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.39■□□□□ 0.69
SYN1P17600 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.39■□□□□ 0.69
SYN1P17600 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.39■□□□□ 0.69
SYN1P17600 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.39■□□□□ 0.69
SYN1P17600 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYN1P17600 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms