Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CCL4P13236 CROCCP3-202ENST00000420820 1947 ntBASIC16.86■□□□□ 0.29
CCL4P13236 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCL4P13236 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CCL4P13236 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 RPSAP43-201ENST00000402237 625 ntBASIC16.86■□□□□ 0.29
CCL4P13236 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL4P13236 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.86■□□□□ 0.29
CCL4P13236 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.86■□□□□ 0.29
CCL4P13236 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.86■□□□□ 0.29
CCL4P13236 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL4P13236 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 SIRPAP1-201ENST00000448467 1770 ntBASIC16.86■□□□□ 0.29
CCL4P13236 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL4P13236 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCL4P13236 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL4P13236 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL4P13236 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL4P13236 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCL4P13236 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.85■□□□□ 0.29
CCL4P13236 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 YBX2P1-201ENST00000394192 760 ntBASIC16.85■□□□□ 0.29
CCL4P13236 SPDYE21P-201ENST00000413323 827 ntBASIC16.85■□□□□ 0.29
CCL4P13236 KRT18P27-201ENST00000427733 1299 ntBASIC16.85■□□□□ 0.29
CCL4P13236 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.85■□□□□ 0.29
CCL4P13236 RNA5SP416-201ENST00000516838 111 ntBASIC16.85■□□□□ 0.29
CCL4P13236 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL4P13236 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL4P13236 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.85■□□□□ 0.29
CCL4P13236 AC040169.1-201ENST00000565382 521 ntBASIC16.85■□□□□ 0.29
CCL4P13236 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL4P13236 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCL4P13236 MIR1199-201ENST00000621445 119 ntBASIC16.85■□□□□ 0.29
CCL4P13236 AC073592.5-201ENST00000624854 528 ntBASIC16.85■□□□□ 0.29
CCL4P13236 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CCL4P13236 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL4P13236 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCL4P13236 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL4P13236 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCL4P13236 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CCL4P13236 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL4P13236 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL4P13236 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL4P13236 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCL4P13236 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 COX5BP2-201ENST00000392354 334 ntBASIC16.84■□□□□ 0.29
CCL4P13236 AC073621.1-201ENST00000392730 636 ntBASIC16.84■□□□□ 0.29
CCL4P13236 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCL4P13236 GPX1P2-201ENST00000429271 606 ntBASIC16.84■□□□□ 0.29
CCL4P13236 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL4P13236 AC103564.2-201ENST00000432853 1299 ntBASIC16.84■□□□□ 0.29
CCL4P13236 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.84■□□□□ 0.29
CCL4P13236 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL4P13236 PRYP5-201ENST00000451909 266 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms