Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT3P12035 GNAS-203ENST00000306120 1878 ntBASIC18.94■□□□□ 0.62
KRT3P12035 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT3P12035 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT3P12035 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT3P12035 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
KRT3P12035 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT3P12035 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT3P12035 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
KRT3P12035 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
KRT3P12035 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT3P12035 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT3P12035 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT3P12035 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT3P12035 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT3P12035 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT3P12035 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT3P12035 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT3P12035 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.93■□□□□ 0.62
KRT3P12035 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT3P12035 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT3P12035 PKD1P1-201ENST00000458669 6805 ntBASIC18.93■□□□□ 0.62
KRT3P12035 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT3P12035 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT3P12035 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT3P12035 AC012317.2-201ENST00000623305 2251 ntBASIC18.93■□□□□ 0.62
KRT3P12035 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 PCDHB18P-201ENST00000524813 2368 ntBASIC18.92■□□□□ 0.62
KRT3P12035 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 AC100803.2-201ENST00000562459 1963 ntBASIC18.92■□□□□ 0.62
KRT3P12035 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
KRT3P12035 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT3P12035 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 IGHGP-201ENST00000390555 1178 ntBASIC18.92■□□□□ 0.62
KRT3P12035 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 KRT18P65-201ENST00000439811 1286 ntBASIC18.92■□□□□ 0.62
KRT3P12035 VENTXP5-201ENST00000523979 775 ntBASIC18.92■□□□□ 0.62
KRT3P12035 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.92■□□□□ 0.62
KRT3P12035 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT3P12035 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT3P12035 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KRT3P12035 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT3P12035 OR6D1P-202ENST00000641007 5290 ntBASIC18.92■□□□□ 0.62
KRT3P12035 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT3P12035 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT3P12035 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT3P12035 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
KRT3P12035 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
KRT3P12035 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT3P12035 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT3P12035 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
KRT3P12035 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.91■□□□□ 0.62
KRT3P12035 AL671277.2-201ENST00000458060 996 ntBASIC18.91■□□□□ 0.62
KRT3P12035 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT3P12035 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT3P12035 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.91■□□□□ 0.62
KRT3P12035 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT3P12035 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.91■□□□□ 0.62
KRT3P12035 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT3P12035 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
KRT3P12035 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
KRT3P12035 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT3P12035 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT3P12035 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
KRT3P12035 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KRT3P12035 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT3P12035 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KRT3P12035 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KRT3P12035 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KRT3P12035 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
KRT3P12035 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT3P12035 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT3P12035 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms