Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINGO3P0C6S8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINGO3P0C6S8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINGO3P0C6S8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.42■□□□□ 0.38
LINGO3P0C6S8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.42■□□□□ 0.38
LINGO3P0C6S8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINGO3P0C6S8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINGO3P0C6S8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINGO3P0C6S8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 TSPY7P-201ENST00000431358 1114 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 B3GAT3P1-201ENST00000471720 806 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 AC011506.1-201ENST00000474329 610 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 AC116562.2-201ENST00000507042 360 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 AC026471.5-201ENST00000615068 467 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 MIR6786-201ENST00000616843 113 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 AC130371.2-201ENST00000619443 611 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 FSCN1P1-201ENST00000568912 1481 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 AC023824.1-201ENST00000562945 2975 ntBASIC17.41■□□□□ 0.38
LINGO3P0C6S8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINGO3P0C6S8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 PCDHA14-201ENST00000506751 2298 ntBASIC17.4■□□□□ 0.38
LINGO3P0C6S8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 AC004951.3-201ENST00000418645 1148 ntBASIC17.4■□□□□ 0.38
LINGO3P0C6S8 SNORA78-201ENST00000459373 127 ntBASIC17.4■□□□□ 0.38
LINGO3P0C6S8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 AC091390.4-202ENST00000476426 537 ntBASIC17.4■□□□□ 0.38
LINGO3P0C6S8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 MIR4497-201ENST00000583208 89 ntBASIC17.4■□□□□ 0.38
LINGO3P0C6S8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINGO3P0C6S8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.39■□□□□ 0.38
LINGO3P0C6S8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LINGO3P0C6S8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LINGO3P0C6S8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LINGO3P0C6S8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 AL355355.2-201ENST00000442321 338 ntBASIC17.39■□□□□ 0.37
LINGO3P0C6S8 AC008040.2-201ENST00000461049 708 ntBASIC17.39■□□□□ 0.37
LINGO3P0C6S8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 MIR4785-201ENST00000585005 73 ntBASIC17.39■□□□□ 0.37
LINGO3P0C6S8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.39■□□□□ 0.37
LINGO3P0C6S8 REXO1L10P-201ENST00000615707 1290 ntBASIC17.39■□□□□ 0.37
LINGO3P0C6S8 AC011298.2-201ENST00000617989 482 ntBASIC17.39■□□□□ 0.37
LINGO3P0C6S8 REXO1L12P-201ENST00000622156 912 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms