Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.54■■□□□ 1.04
CHGBP05060 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 RCN1P2-201ENST00000398357 915 ntBASIC21.54■■□□□ 1.04
CHGBP05060 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.54■■□□□ 1.04
CHGBP05060 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.54■■□□□ 1.04
CHGBP05060 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.54■■□□□ 1.04
CHGBP05060 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.54■■□□□ 1.04
CHGBP05060 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.54■■□□□ 1.04
CHGBP05060 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.54■■□□□ 1.04
CHGBP05060 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.54■■□□□ 1.04
CHGBP05060 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.54■■□□□ 1.04
CHGBP05060 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
CHGBP05060 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CHGBP05060 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHGBP05060 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.53■■□□□ 1.04
CHGBP05060 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
CHGBP05060 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 NUS1P2-201ENST00000417358 873 ntBASIC21.53■■□□□ 1.04
CHGBP05060 TSPY19P-201ENST00000418461 509 ntBASIC21.53■■□□□ 1.04
CHGBP05060 TSPY18P-201ENST00000441642 509 ntBASIC21.53■■□□□ 1.04
CHGBP05060 PRELID1P1-202ENST00000567272 903 ntBASIC21.53■■□□□ 1.04
CHGBP05060 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.53■■□□□ 1.04
CHGBP05060 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHGBP05060 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHGBP05060 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHGBP05060 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHGBP05060 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.52■■□□□ 1.04
CHGBP05060 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHGBP05060 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CHGBP05060 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CHGBP05060 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CHGBP05060 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.52■■□□□ 1.04
CHGBP05060 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHGBP05060 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CHGBP05060 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
CHGBP05060 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.52■■□□□ 1.04
CHGBP05060 AC096582.2-201ENST00000510860 516 ntBASIC21.52■■□□□ 1.04
CHGBP05060 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.52■■□□□ 1.04
CHGBP05060 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CHGBP05060 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CHGBP05060 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHGBP05060 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHGBP05060 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CHGBP05060 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CHGBP05060 TP73-AS1-210ENST00000637775 1455 ntBASIC21.52■■□□□ 1.03
CHGBP05060 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHGBP05060 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHGBP05060 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.51■■□□□ 1.03
CHGBP05060 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.51■■□□□ 1.03
CHGBP05060 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.51■■□□□ 1.03
CHGBP05060 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHGBP05060 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHGBP05060 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.51■■□□□ 1.03
CHGBP05060 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHGBP05060 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.51■■□□□ 1.03
CHGBP05060 NUS1P1-201ENST00000446295 882 ntBASIC21.51■■□□□ 1.03
CHGBP05060 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.51■■□□□ 1.03
CHGBP05060 KRT126P-201ENST00000549467 1181 ntBASIC21.51■■□□□ 1.03
CHGBP05060 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.51■■□□□ 1.03
CHGBP05060 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.51■■□□□ 1.03
CHGBP05060 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.51■■□□□ 1.03
CHGBP05060 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.51■■□□□ 1.03
CHGBP05060 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.51■■□□□ 1.03
CHGBP05060 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CHGBP05060 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.51■■□□□ 1.03
CHGBP05060 AC005332.8-201ENST00000622750 2735 ntBASIC21.51■■□□□ 1.03
CHGBP05060 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CHGBP05060 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHGBP05060 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CHGBP05060 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHGBP05060 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHGBP05060 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CHGBP05060 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CHGBP05060 FZD10-202ENST00000539839 3282 ntBASIC21.51■■□□□ 1.03
CHGBP05060 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHGBP05060 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHGBP05060 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHGBP05060 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHGBP05060 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms