Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPNS1P04632 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.85■□□□□ 0.45
CAPNS1P04632 AL136038.4-201ENST00000603606 1261 ntBASIC17.85■□□□□ 0.45
CAPNS1P04632 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.85■□□□□ 0.45
CAPNS1P04632 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.85■□□□□ 0.45
CAPNS1P04632 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CAPNS1P04632 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.85■□□□□ 0.45
CAPNS1P04632 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPNS1P04632 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPNS1P04632 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.85■□□□□ 0.45
CAPNS1P04632 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CAPNS1P04632 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CAPNS1P04632 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPNS1P04632 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPNS1P04632 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
CAPNS1P04632 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CAPNS1P04632 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CAPNS1P04632 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPNS1P04632 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 AL031284.1-201ENST00000419297 478 ntBASIC17.84■□□□□ 0.45
CAPNS1P04632 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPNS1P04632 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CAPNS1P04632 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.84■□□□□ 0.45
CAPNS1P04632 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPNS1P04632 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CAPNS1P04632 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.84■□□□□ 0.45
CAPNS1P04632 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.84■□□□□ 0.45
CAPNS1P04632 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CAPNS1P04632 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CAPNS1P04632 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
CAPNS1P04632 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPNS1P04632 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CAPNS1P04632 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.83■□□□□ 0.45
CAPNS1P04632 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPNS1P04632 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPNS1P04632 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPNS1P04632 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPNS1P04632 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPNS1P04632 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.83■□□□□ 0.45
CAPNS1P04632 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPNS1P04632 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CAPNS1P04632 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CAPNS1P04632 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.83■□□□□ 0.44
CAPNS1P04632 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.83■□□□□ 0.44
CAPNS1P04632 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPNS1P04632 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPNS1P04632 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CAPNS1P04632 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPNS1P04632 AC027796.2-201ENST00000575326 344 ntBASIC17.83■□□□□ 0.44
CAPNS1P04632 AC090616.6-201ENST00000582640 721 ntBASIC17.83■□□□□ 0.44
CAPNS1P04632 TERC-201ENST00000602385 541 ntBASIC17.83■□□□□ 0.44
CAPNS1P04632 AC099336.1-202ENST00000602961 463 ntBASIC17.83■□□□□ 0.44
CAPNS1P04632 AC140113.2-201ENST00000604370 208 ntBASIC17.83■□□□□ 0.44
CAPNS1P04632 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.83■□□□□ 0.44
CAPNS1P04632 AL157888.1-201ENST00000631930 593 ntBASIC17.83■□□□□ 0.44
CAPNS1P04632 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CAPNS1P04632 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.83■□□□□ 0.44
CAPNS1P04632 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CAPNS1P04632 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CAPNS1P04632 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CAPNS1P04632 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CAPNS1P04632 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CAPNS1P04632 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CAPNS1P04632 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPNS1P04632 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPNS1P04632 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPNS1P04632 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 AC243591.1-201ENST00000452967 1364 ntBASIC17.82■□□□□ 0.44
CAPNS1P04632 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CAPNS1P04632 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms