Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT33AO76009 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KRT33AO76009 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KRT33AO76009 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 DUX4L26-201ENST00000489078 1255 ntBASIC16.31■□□□□ 0.2
KRT33AO76009 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT33AO76009 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 MIR3180-4-201ENST00000582223 153 ntBASIC16.31■□□□□ 0.2
KRT33AO76009 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT33AO76009 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT33AO76009 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 AC012313.1-201ENST00000593393 3059 ntBASIC16.31■□□□□ 0.2
KRT33AO76009 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT33AO76009 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT33AO76009 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KRT33AO76009 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT33AO76009 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
KRT33AO76009 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KRT33AO76009 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT33AO76009 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 AL163051.1-201ENST00000569214 1512 ntBASIC16.3■□□□□ 0.2
KRT33AO76009 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT33AO76009 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT33AO76009 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT33AO76009 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
KRT33AO76009 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT33AO76009 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT33AO76009 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
KRT33AO76009 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
KRT33AO76009 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT33AO76009 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT33AO76009 AL359075.1-203ENST00000462729 1002 ntBASIC16.3■□□□□ 0.2
KRT33AO76009 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 MIR3917-201ENST00000580971 93 ntBASIC16.3■□□□□ 0.2
KRT33AO76009 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KRT33AO76009 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KRT33AO76009 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT33AO76009 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT33AO76009 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
KRT33AO76009 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 AC009102.3-201ENST00000623118 1491 ntBASIC16.29■□□□□ 0.2
KRT33AO76009 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT33AO76009 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KRT33AO76009 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
KRT33AO76009 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT33AO76009 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
KRT33AO76009 MIR149-201ENST00000384879 89 ntBASIC16.29■□□□□ 0.2
KRT33AO76009 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT33AO76009 FAM8A6P-201ENST00000407496 1135 ntBASIC16.29■□□□□ 0.2
KRT33AO76009 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
KRT33AO76009 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT33AO76009 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms