Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PDCD6O75340 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
PDCD6O75340 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDCD6O75340 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
PDCD6O75340 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
PDCD6O75340 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
PDCD6O75340 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.17■□□□□ 0.02
PDCD6O75340 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PDCD6O75340 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
PDCD6O75340 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PDCD6O75340 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.17■□□□□ 0.02
PDCD6O75340 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.17■□□□□ 0.02
PDCD6O75340 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.17■□□□□ 0.02
PDCD6O75340 SNORA78-201ENST00000459373 127 ntBASIC15.17■□□□□ 0.02
PDCD6O75340 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.17■□□□□ 0.02
PDCD6O75340 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.17■□□□□ 0.02
PDCD6O75340 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 NEK4P2-201ENST00000580004 1012 ntBASIC15.17■□□□□ 0.02
PDCD6O75340 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
PDCD6O75340 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PDCD6O75340 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.17■□□□□ 0.02
PDCD6O75340 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.17■□□□□ 0.02
PDCD6O75340 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.17■□□□□ 0.02
PDCD6O75340 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PDCD6O75340 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PDCD6O75340 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDCD6O75340 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDCD6O75340 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDCD6O75340 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.16■□□□□ 0.02
PDCD6O75340 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.16■□□□□ 0.02
PDCD6O75340 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.16■□□□□ 0.02
PDCD6O75340 AL138688.1-201ENST00000624851 1594 ntBASIC15.16■□□□□ 0.02
PDCD6O75340 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PDCD6O75340 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDCD6O75340 INGX-201ENST00000359239 846 ntBASIC15.16■□□□□ 0.02
PDCD6O75340 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.16■□□□□ 0.02
PDCD6O75340 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PDCD6O75340 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.16■□□□□ 0.02
PDCD6O75340 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.16■□□□□ 0.02
PDCD6O75340 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.16■□□□□ 0.02
PDCD6O75340 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.16■□□□□ 0.02
PDCD6O75340 MIR3917-201ENST00000580971 93 ntBASIC15.16■□□□□ 0.02
PDCD6O75340 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.16■□□□□ 0.02
PDCD6O75340 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.16■□□□□ 0.02
PDCD6O75340 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDCD6O75340 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDCD6O75340 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 LINC00167-201ENST00000530583 1419 ntBASIC15.16■□□□□ 0.02
PDCD6O75340 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.16■□□□□ 0.02
PDCD6O75340 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.16■□□□□ 0.02
PDCD6O75340 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDCD6O75340 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDCD6O75340 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PDCD6O75340 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.15■□□□□ 0.02
PDCD6O75340 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDCD6O75340 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDCD6O75340 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.15■□□□□ 0.02
PDCD6O75340 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.15■□□□□ 0.02
PDCD6O75340 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDCD6O75340 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.15■□□□□ 0.02
PDCD6O75340 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDCD6O75340 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDCD6O75340 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDCD6O75340 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDCD6O75340 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.15■□□□□ 0.02
PDCD6O75340 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.15■□□□□ 0.02
PDCD6O75340 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDCD6O75340 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms