Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.79■□□□□ 0.28
HCN1O60741 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HCN1O60741 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HCN1O60741 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 AL645929.1-201ENST00000420084 975 ntBASIC16.79■□□□□ 0.28
HCN1O60741 AC092597.1-201ENST00000487352 616 ntBASIC16.79■□□□□ 0.28
HCN1O60741 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.79■□□□□ 0.28
HCN1O60741 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.79■□□□□ 0.28
HCN1O60741 AL157888.1-201ENST00000631930 593 ntBASIC16.79■□□□□ 0.28
HCN1O60741 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HCN1O60741 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HCN1O60741 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.79■□□□□ 0.28
HCN1O60741 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HCN1O60741 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCN1O60741 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HCN1O60741 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HCN1O60741 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 AC093677.2-201ENST00000600169 1863 ntBASIC16.78■□□□□ 0.28
HCN1O60741 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HCN1O60741 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
HCN1O60741 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.78■□□□□ 0.28
HCN1O60741 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 AP000593.1-201ENST00000393668 712 ntBASIC16.78■□□□□ 0.28
HCN1O60741 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.78■□□□□ 0.28
HCN1O60741 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.78■□□□□ 0.28
HCN1O60741 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HCN1O60741 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HCN1O60741 SPDYE13P-201ENST00000445314 798 ntBASIC16.78■□□□□ 0.28
HCN1O60741 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.78■□□□□ 0.28
HCN1O60741 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.78■□□□□ 0.28
HCN1O60741 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HCN1O60741 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.78■□□□□ 0.28
HCN1O60741 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.78■□□□□ 0.28
HCN1O60741 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 AC010240.3-201ENST00000607688 395 ntBASIC16.78■□□□□ 0.28
HCN1O60741 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.78■□□□□ 0.28
HCN1O60741 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.78■□□□□ 0.28
HCN1O60741 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.78■□□□□ 0.28
HCN1O60741 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.78■□□□□ 0.28
HCN1O60741 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
HCN1O60741 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.78■□□□□ 0.28
HCN1O60741 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCN1O60741 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HCN1O60741 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.77■□□□□ 0.28
HCN1O60741 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.77■□□□□ 0.28
HCN1O60741 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
HCN1O60741 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
HCN1O60741 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.77■□□□□ 0.28
HCN1O60741 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HCN1O60741 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.77■□□□□ 0.28
HCN1O60741 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
HCN1O60741 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.77■□□□□ 0.28
HCN1O60741 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.77■□□□□ 0.28
HCN1O60741 HLA-F-220ENST00000434407 884 ntBASIC16.77■□□□□ 0.28
HCN1O60741 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HCN1O60741 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HCN1O60741 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCN1O60741 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.77■□□□□ 0.28
HCN1O60741 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HCN1O60741 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HCN1O60741 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
HCN1O60741 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms