Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNCRIPO60506 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNCRIPO60506 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNCRIPO60506 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNCRIPO60506 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.34■□□□□ 0.53
SYNCRIPO60506 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNCRIPO60506 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 REXO1L6P-202ENST00000619970 1078 ntBASIC18.34■□□□□ 0.53
SYNCRIPO60506 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNCRIPO60506 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNCRIPO60506 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNCRIPO60506 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNCRIPO60506 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNCRIPO60506 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNCRIPO60506 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SYNCRIPO60506 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNCRIPO60506 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.33■□□□□ 0.53
SYNCRIPO60506 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.33■□□□□ 0.53
SYNCRIPO60506 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SYNCRIPO60506 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
SYNCRIPO60506 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNCRIPO60506 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
SYNCRIPO60506 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 AC079776.4-201ENST00000511039 504 ntBASIC18.33■□□□□ 0.52
SYNCRIPO60506 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 MIR5100-201ENST00000579544 119 ntBASIC18.33■□□□□ 0.52
SYNCRIPO60506 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 BNIP3P18-201ENST00000593976 575 ntBASIC18.33■□□□□ 0.52
SYNCRIPO60506 AC009154.2-201ENST00000621177 724 ntBASIC18.33■□□□□ 0.52
SYNCRIPO60506 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNCRIPO60506 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.33■□□□□ 0.52
SYNCRIPO60506 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 AC068472.1-201ENST00000474589 881 ntBASIC18.32■□□□□ 0.52
SYNCRIPO60506 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 AC064862.7-201ENST00000604520 867 ntBASIC18.32■□□□□ 0.52
SYNCRIPO60506 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 AC114341.1-201ENST00000618070 349 ntBASIC18.32■□□□□ 0.52
SYNCRIPO60506 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNCRIPO60506 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNCRIPO60506 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNCRIPO60506 AC135050.7-201ENST00000624508 2218 ntBASIC18.31■□□□□ 0.52
SYNCRIPO60506 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNCRIPO60506 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNCRIPO60506 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYNCRIPO60506 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYNCRIPO60506 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNCRIPO60506 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SYNCRIPO60506 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYNCRIPO60506 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms