Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SNX3O60493 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX3O60493 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SNX3O60493 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX3O60493 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SNX3O60493 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SNX3O60493 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX3O60493 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SNX3O60493 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 AL513477.1-201ENST00000602865 2407 ntBASIC17.67■□□□□ 0.42
SNX3O60493 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX3O60493 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SNX3O60493 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SNX3O60493 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.67■□□□□ 0.42
SNX3O60493 AL023284.2-201ENST00000405850 579 ntBASIC17.67■□□□□ 0.42
SNX3O60493 AC004980.1-204ENST00000429707 299 ntBASIC17.67■□□□□ 0.42
SNX3O60493 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.67■□□□□ 0.42
SNX3O60493 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.67■□□□□ 0.42
SNX3O60493 AC131212.4-201ENST00000623606 975 ntBASIC17.67■□□□□ 0.42
SNX3O60493 LINC01451-201ENST00000623792 534 ntBASIC17.67■□□□□ 0.42
SNX3O60493 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SNX3O60493 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX3O60493 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX3O60493 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX3O60493 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SNX3O60493 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 AC103702.1-201ENST00000548801 2630 ntBASIC17.67■□□□□ 0.42
SNX3O60493 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX3O60493 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX3O60493 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX3O60493 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SNX3O60493 AC005915.1-201ENST00000624912 2018 ntBASIC17.66■□□□□ 0.42
SNX3O60493 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX3O60493 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX3O60493 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.66■□□□□ 0.42
SNX3O60493 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SNX3O60493 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX3O60493 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX3O60493 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX3O60493 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SNX3O60493 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SNX3O60493 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX3O60493 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SNX3O60493 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.65■□□□□ 0.42
SNX3O60493 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX3O60493 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.65■□□□□ 0.42
SNX3O60493 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SNX3O60493 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.65■□□□□ 0.42
SNX3O60493 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX3O60493 REXO1L11P-201ENST00000620964 1927 ntBASIC17.65■□□□□ 0.42
SNX3O60493 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX3O60493 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX3O60493 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX3O60493 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX3O60493 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.65■□□□□ 0.42
SNX3O60493 UNC93B4-201ENST00000505679 747 ntBASIC17.65■□□□□ 0.42
SNX3O60493 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms