Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
LDB2O43679 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.94■□□□□ 0.46
LDB2O43679 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LDB2O43679 MTCL1P1-201ENST00000446207 792 ntBASIC17.94■□□□□ 0.46
LDB2O43679 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.94■□□□□ 0.46
LDB2O43679 FAM86EP-206ENST00000510506 987 ntBASIC17.94■□□□□ 0.46
LDB2O43679 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.94■□□□□ 0.46
LDB2O43679 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.94■□□□□ 0.46
LDB2O43679 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
LDB2O43679 AC011498.5-201ENST00000592027 486 ntBASIC17.94■□□□□ 0.46
LDB2O43679 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.94■□□□□ 0.46
LDB2O43679 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 AC005332.1-201ENST00000577698 1310 ntBASIC17.94■□□□□ 0.46
LDB2O43679 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LDB2O43679 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 AC026471.1-201ENST00000564629 3026 ntBASIC17.93■□□□□ 0.46
LDB2O43679 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.93■□□□□ 0.46
LDB2O43679 AC009949.1-201ENST00000623048 1830 ntBASIC17.93■□□□□ 0.46
LDB2O43679 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
LDB2O43679 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.93■□□□□ 0.46
LDB2O43679 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LDB2O43679 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.93■□□□□ 0.46
LDB2O43679 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.93■□□□□ 0.46
LDB2O43679 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.93■□□□□ 0.46
LDB2O43679 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
LDB2O43679 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.93■□□□□ 0.46
LDB2O43679 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LDB2O43679 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LDB2O43679 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
LDB2O43679 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.93■□□□□ 0.46
LDB2O43679 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
LDB2O43679 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LDB2O43679 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.92■□□□□ 0.46
LDB2O43679 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LDB2O43679 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.92■□□□□ 0.46
LDB2O43679 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LDB2O43679 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.92■□□□□ 0.46
LDB2O43679 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.92■□□□□ 0.46
LDB2O43679 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.92■□□□□ 0.46
LDB2O43679 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.92■□□□□ 0.46
LDB2O43679 TSPY22P-201ENST00000427496 604 ntBASIC17.92■□□□□ 0.46
LDB2O43679 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.92■□□□□ 0.46
LDB2O43679 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.92■□□□□ 0.46
LDB2O43679 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
LDB2O43679 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.92■□□□□ 0.46
LDB2O43679 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LDB2O43679 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.92■□□□□ 0.46
LDB2O43679 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LDB2O43679 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB2O43679 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LDB2O43679 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LDB2O43679 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LDB2O43679 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.91■□□□□ 0.46
LDB2O43679 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.91■□□□□ 0.46
LDB2O43679 RN7SL606P-201ENST00000472779 293 ntBASIC17.91■□□□□ 0.46
LDB2O43679 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms