Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXA3O43365 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXA3O43365 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXA3O43365 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HOXA3O43365 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HOXA3O43365 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXA3O43365 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA3O43365 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXA3O43365 AC125634.1-201ENST00000438758 1403 ntBASIC14.41□□□□□ -0.1
HOXA3O43365 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HOXA3O43365 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA3O43365 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXA3O43365 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXA3O43365 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
HOXA3O43365 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXA3O43365 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HOXA3O43365 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HOXA3O43365 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXA3O43365 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HOXA3O43365 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 RBM17P3-201ENST00000417687 1192 ntBASIC14.41□□□□□ -0.1
HOXA3O43365 FGFR3P6-201ENST00000457012 610 ntBASIC14.41□□□□□ -0.1
HOXA3O43365 RNPS1P1-201ENST00000507437 918 ntBASIC14.41□□□□□ -0.1
HOXA3O43365 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.41□□□□□ -0.1
HOXA3O43365 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXA3O43365 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXA3O43365 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.41□□□□□ -0.1
HOXA3O43365 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXA3O43365 AP001269.4-201ENST00000609611 512 ntBASIC14.41□□□□□ -0.1
HOXA3O43365 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXA3O43365 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXA3O43365 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXA3O43365 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HOXA3O43365 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HOXA3O43365 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA3O43365 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HOXA3O43365 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.41□□□□□ -0.1
HOXA3O43365 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HOXA3O43365 INTS4P1-201ENST00000438455 1935 ntBASIC14.41□□□□□ -0.1
HOXA3O43365 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXA3O43365 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA3O43365 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
HOXA3O43365 AC004408.2-201ENST00000623613 2777 ntBASIC14.4□□□□□ -0.1
HOXA3O43365 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HOXA3O43365 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.4□□□□□ -0.1
HOXA3O43365 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
HOXA3O43365 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HOXA3O43365 PMS2P1-201ENST00000431037 1228 ntBASIC14.4□□□□□ -0.1
HOXA3O43365 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.4□□□□□ -0.1
HOXA3O43365 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HOXA3O43365 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HOXA3O43365 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.4□□□□□ -0.1
HOXA3O43365 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.4□□□□□ -0.1
HOXA3O43365 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HOXA3O43365 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.4□□□□□ -0.1
HOXA3O43365 GPALPP1-207ENST00000611650 899 ntBASIC14.4□□□□□ -0.1
HOXA3O43365 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
HOXA3O43365 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HOXA3O43365 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA3O43365 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.4□□□□□ -0.1
HOXA3O43365 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms