Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC3O15379 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC3O15379 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HDAC3O15379 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC3O15379 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC3O15379 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC3O15379 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC3O15379 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC3O15379 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HDAC3O15379 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC3O15379 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC3O15379 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC3O15379 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HDAC3O15379 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.48■□□□□ 0.39
HDAC3O15379 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC3O15379 AP005242.2-201ENST00000580065 1175 ntBASIC17.48■□□□□ 0.39
HDAC3O15379 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC3O15379 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HDAC3O15379 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.48■□□□□ 0.39
HDAC3O15379 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC3O15379 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.47■□□□□ 0.39
HDAC3O15379 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.47■□□□□ 0.39
HDAC3O15379 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.47■□□□□ 0.39
HDAC3O15379 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 SLC25A1P2-201ENST00000430693 912 ntBASIC17.47■□□□□ 0.39
HDAC3O15379 TSPY17P-201ENST00000450329 467 ntBASIC17.47■□□□□ 0.39
HDAC3O15379 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 AL353719.1-201ENST00000566847 864 ntBASIC17.47■□□□□ 0.39
HDAC3O15379 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 REXO1L10P-201ENST00000615707 1290 ntBASIC17.47■□□□□ 0.39
HDAC3O15379 REXO1L12P-201ENST00000622156 912 ntBASIC17.47■□□□□ 0.39
HDAC3O15379 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.47■□□□□ 0.39
HDAC3O15379 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HDAC3O15379 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HDAC3O15379 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC3O15379 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HDAC3O15379 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HDAC3O15379 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC3O15379 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.46■□□□□ 0.39
HDAC3O15379 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HDAC3O15379 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HDAC3O15379 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.46■□□□□ 0.39
HDAC3O15379 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.46■□□□□ 0.39
HDAC3O15379 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HDAC3O15379 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC3O15379 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC3O15379 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC3O15379 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.46■□□□□ 0.38
HDAC3O15379 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.46■□□□□ 0.38
HDAC3O15379 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC3O15379 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms