Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTLC1O15269 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTLC1O15269 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.17■□□□□ 0.66
SPTLC1O15269 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.17■□□□□ 0.66
SPTLC1O15269 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.17■□□□□ 0.66
SPTLC1O15269 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SPTLC1O15269 AC079781.3-201ENST00000449110 356 ntBASIC19.17■□□□□ 0.66
SPTLC1O15269 LINC01711-201ENST00000598340 967 ntBASIC19.17■□□□□ 0.66
SPTLC1O15269 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.17■□□□□ 0.66
SPTLC1O15269 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SPTLC1O15269 LETM1P2-201ENST00000597330 2178 ntBASIC19.17■□□□□ 0.66
SPTLC1O15269 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SPTLC1O15269 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SPTLC1O15269 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SPTLC1O15269 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTLC1O15269 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.17■□□□□ 0.66
SPTLC1O15269 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.16■□□□□ 0.66
SPTLC1O15269 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SPTLC1O15269 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.16■□□□□ 0.66
SPTLC1O15269 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 AP000997.3-201ENST00000623333 2250 ntBASIC19.16■□□□□ 0.66
SPTLC1O15269 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SPTLC1O15269 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 AC100803.2-201ENST00000562459 1963 ntBASIC19.16■□□□□ 0.66
SPTLC1O15269 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.16■□□□□ 0.66
SPTLC1O15269 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.16■□□□□ 0.66
SPTLC1O15269 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.16■□□□□ 0.66
SPTLC1O15269 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.16■□□□□ 0.66
SPTLC1O15269 AC011467.2-201ENST00000598425 242 ntBASIC19.16■□□□□ 0.66
SPTLC1O15269 AC104692.2-201ENST00000603054 253 ntBASIC19.16■□□□□ 0.66
SPTLC1O15269 AL591684.3-201ENST00000605187 298 ntBASIC19.16■□□□□ 0.66
SPTLC1O15269 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.16■□□□□ 0.66
SPTLC1O15269 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.16■□□□□ 0.66
SPTLC1O15269 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
SPTLC1O15269 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.16■□□□□ 0.66
SPTLC1O15269 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.16■□□□□ 0.66
SPTLC1O15269 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SPTLC1O15269 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTLC1O15269 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SPTLC1O15269 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
SPTLC1O15269 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.16■□□□□ 0.66
SPTLC1O15269 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.15■□□□□ 0.66
SPTLC1O15269 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SPTLC1O15269 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SPTLC1O15269 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.15■□□□□ 0.66
SPTLC1O15269 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.15■□□□□ 0.66
SPTLC1O15269 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
SPTLC1O15269 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.15■□□□□ 0.66
SPTLC1O15269 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 AC009533.2-201ENST00000543664 586 ntBASIC19.15■□□□□ 0.66
SPTLC1O15269 AL662844.1-201ENST00000546340 181 ntBASIC19.15■□□□□ 0.66
SPTLC1O15269 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.15■□□□□ 0.66
SPTLC1O15269 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.15■□□□□ 0.66
SPTLC1O15269 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.15■□□□□ 0.66
SPTLC1O15269 REXO1L6P-202ENST00000619970 1078 ntBASIC19.15■□□□□ 0.66
SPTLC1O15269 AC117500.6-201ENST00000624871 588 ntBASIC19.15■□□□□ 0.66
SPTLC1O15269 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.15■□□□□ 0.66
SPTLC1O15269 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SPTLC1O15269 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 INTS4P1-201ENST00000438455 1935 ntBASIC19.15■□□□□ 0.66
SPTLC1O15269 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.15■□□□□ 0.66
SPTLC1O15269 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
SPTLC1O15269 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.15■□□□□ 0.66
SPTLC1O15269 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTLC1O15269 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
SPTLC1O15269 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms