Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TO15178 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TO15178 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TO15178 KRT8P47-201ENST00000604727 1398 ntBASIC16.52■□□□□ 0.24
TO15178 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.52■□□□□ 0.24
TO15178 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TO15178 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TO15178 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.52■□□□□ 0.24
TO15178 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.52■□□□□ 0.24
TO15178 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.52■□□□□ 0.24
TO15178 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TO15178 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TO15178 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.52■□□□□ 0.24
TO15178 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
TO15178 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TO15178 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TO15178 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TO15178 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TO15178 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TO15178 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.52■□□□□ 0.24
TO15178 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.52■□□□□ 0.24
TO15178 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TO15178 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.52■□□□□ 0.24
TO15178 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TO15178 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.52■□□□□ 0.24
TO15178 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TO15178 AC116407.2-201ENST00000613639 860 ntBASIC16.52■□□□□ 0.24
TO15178 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TO15178 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TO15178 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TO15178 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TO15178 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TO15178 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.52■□□□□ 0.23
TO15178 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TO15178 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.52■□□□□ 0.23
TO15178 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TO15178 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TO15178 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.51■□□□□ 0.23
TO15178 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 AC097374.2-201ENST00000618617 1306 ntBASIC16.51■□□□□ 0.23
TO15178 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.51■□□□□ 0.23
TO15178 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 VENTXP7-201ENST00000475503 772 ntBASIC16.51■□□□□ 0.23
TO15178 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.51■□□□□ 0.23
TO15178 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.51■□□□□ 0.23
TO15178 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.51■□□□□ 0.23
TO15178 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
TO15178 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.51■□□□□ 0.23
TO15178 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TO15178 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TO15178 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TO15178 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.51■□□□□ 0.23
TO15178 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TO15178 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TO15178 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TO15178 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.5■□□□□ 0.23
TO15178 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TO15178 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.5■□□□□ 0.23
TO15178 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.5■□□□□ 0.23
TO15178 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TO15178 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.5■□□□□ 0.23
TO15178 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TO15178 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TO15178 AC096633.1-201ENST00000422446 749 ntBASIC16.5■□□□□ 0.23
TO15178 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.5■□□□□ 0.23
TO15178 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.5■□□□□ 0.23
TO15178 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.5■□□□□ 0.23
TO15178 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TO15178 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms