Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 AC004706.3-202ENST00000621574 984 ntBASIC19.29■□□□□ 0.68
CEP290O15078 FP475955.4-201ENST00000623131 1990 ntBASIC19.29■□□□□ 0.68
CEP290O15078 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.29■□□□□ 0.68
CEP290O15078 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.29■□□□□ 0.68
CEP290O15078 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.29■□□□□ 0.68
CEP290O15078 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEP290O15078 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.29■□□□□ 0.68
CEP290O15078 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEP290O15078 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.29■□□□□ 0.68
CEP290O15078 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEP290O15078 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.29■□□□□ 0.68
CEP290O15078 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEP290O15078 AC079776.1-201ENST00000401540 1152 ntBASIC19.29■□□□□ 0.68
CEP290O15078 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.29■□□□□ 0.68
CEP290O15078 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.29■□□□□ 0.68
CEP290O15078 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.29■□□□□ 0.68
CEP290O15078 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CEP290O15078 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.29■□□□□ 0.68
CEP290O15078 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CEP290O15078 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.29■□□□□ 0.68
CEP290O15078 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.29■□□□□ 0.68
CEP290O15078 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CEP290O15078 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.28■□□□□ 0.68
CEP290O15078 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CEP290O15078 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CEP290O15078 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.28■□□□□ 0.68
CEP290O15078 SPDYE11-202ENST00000450699 704 ntBASIC19.28■□□□□ 0.68
CEP290O15078 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.28■□□□□ 0.68
CEP290O15078 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.28■□□□□ 0.68
CEP290O15078 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.28■□□□□ 0.68
CEP290O15078 SPDYE9P-201ENST00000570642 692 ntBASIC19.28■□□□□ 0.68
CEP290O15078 SPDYE10P-202ENST00000612005 668 ntBASIC19.28■□□□□ 0.68
CEP290O15078 SPDYE8P-202ENST00000612377 668 ntBASIC19.28■□□□□ 0.68
CEP290O15078 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CEP290O15078 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CEP290O15078 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.28■□□□□ 0.68
CEP290O15078 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.28■□□□□ 0.68
CEP290O15078 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CEP290O15078 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CEP290O15078 TUBB3P1-201ENST00000405796 1332 ntBASIC19.28■□□□□ 0.68
CEP290O15078 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CEP290O15078 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.28■□□□□ 0.68
CEP290O15078 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CEP290O15078 MRPS18AP1-201ENST00000414458 589 ntBASIC19.28■□□□□ 0.68
CEP290O15078 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.28■□□□□ 0.68
CEP290O15078 AL033527.4-201ENST00000641026 673 ntBASIC19.28■□□□□ 0.68
CEP290O15078 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.28■□□□□ 0.68
CEP290O15078 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
CEP290O15078 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.27■□□□□ 0.68
CEP290O15078 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CEP290O15078 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CEP290O15078 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CEP290O15078 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CEP290O15078 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.27■□□□□ 0.68
CEP290O15078 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CEP290O15078 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.27■□□□□ 0.68
CEP290O15078 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.27■□□□□ 0.68
CEP290O15078 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.27■□□□□ 0.68
CEP290O15078 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.27■□□□□ 0.68
CEP290O15078 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CEP290O15078 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CEP290O15078 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CEP290O15078 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CEP290O15078 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CEP290O15078 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.27■□□□□ 0.67
CEP290O15078 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CEP290O15078 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.27■□□□□ 0.67
CEP290O15078 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.27■□□□□ 0.67
CEP290O15078 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.27■□□□□ 0.67
CEP290O15078 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.26■□□□□ 0.67
CEP290O15078 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CEP290O15078 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.26■□□□□ 0.67
CEP290O15078 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.26■□□□□ 0.67
CEP290O15078 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.26■□□□□ 0.67
CEP290O15078 KRT8P48-201ENST00000515599 1220 ntBASIC19.26■□□□□ 0.67
CEP290O15078 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.26■□□□□ 0.67
CEP290O15078 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.26■□□□□ 0.67
CEP290O15078 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.26■□□□□ 0.67
CEP290O15078 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.26■□□□□ 0.67
CEP290O15078 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.26■□□□□ 0.67
CEP290O15078 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CEP290O15078 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CEP290O15078 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CEP290O15078 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CEP290O15078 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.26■□□□□ 0.67
CEP290O15078 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.26■□□□□ 0.67
CEP290O15078 AC092580.3-201ENST00000430932 139 ntBASIC19.26■□□□□ 0.67
CEP290O15078 DDX43P3-201ENST00000441064 443 ntBASIC19.26■□□□□ 0.67
CEP290O15078 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.26■□□□□ 0.67
CEP290O15078 AC112191.1-201ENST00000523689 701 ntBASIC19.26■□□□□ 0.67
CEP290O15078 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.26■□□□□ 0.67
CEP290O15078 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.26■□□□□ 0.67
CEP290O15078 FO538757.1-201ENST00000623083 1397 ntBASIC19.26■□□□□ 0.67
CEP290O15078 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CEP290O15078 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CEP290O15078 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.25■□□□□ 0.67
CEP290O15078 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CEP290O15078 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CEP290O15078 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CEP290O15078 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms