Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AC090164.3-201ENST00000610780 2143 ntBASIC21.54■■□□□ 1.04
SEMA3EO15041 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.54■■□□□ 1.04
SEMA3EO15041 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.54■■□□□ 1.04
SEMA3EO15041 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SEMA3EO15041 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.54■■□□□ 1.04
SEMA3EO15041 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.54■■□□□ 1.04
SEMA3EO15041 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SEMA3EO15041 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.53■■□□□ 1.04
SEMA3EO15041 AC139887.3-201ENST00000568585 713 ntBASIC21.53■■□□□ 1.04
SEMA3EO15041 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.53■■□□□ 1.04
SEMA3EO15041 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.53■■□□□ 1.04
SEMA3EO15041 AC025062.2-201ENST00000605477 670 ntBASIC21.53■■□□□ 1.04
SEMA3EO15041 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.53■■□□□ 1.04
SEMA3EO15041 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.53■■□□□ 1.04
SEMA3EO15041 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 SIGLEC16-201ENST00000599858 1437 ntBASIC21.53■■□□□ 1.04
SEMA3EO15041 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SEMA3EO15041 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.53■■□□□ 1.04
SEMA3EO15041 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.52■■□□□ 1.04
SEMA3EO15041 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.52■■□□□ 1.04
SEMA3EO15041 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SEMA3EO15041 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SEMA3EO15041 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SEMA3EO15041 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
SEMA3EO15041 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.52■■□□□ 1.04
SEMA3EO15041 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.52■■□□□ 1.04
SEMA3EO15041 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.52■■□□□ 1.04
SEMA3EO15041 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.52■■□□□ 1.04
SEMA3EO15041 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SEMA3EO15041 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SEMA3EO15041 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.52■■□□□ 1.04
SEMA3EO15041 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SEMA3EO15041 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.52■■□□□ 1.04
SEMA3EO15041 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.52■■□□□ 1.04
SEMA3EO15041 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SEMA3EO15041 DDX43P3-201ENST00000441064 443 ntBASIC21.52■■□□□ 1.04
SEMA3EO15041 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.52■■□□□ 1.04
SEMA3EO15041 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.52■■□□□ 1.04
SEMA3EO15041 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.52■■□□□ 1.04
SEMA3EO15041 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.52■■□□□ 1.04
SEMA3EO15041 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SEMA3EO15041 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.52■■□□□ 1.04
SEMA3EO15041 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.52■■□□□ 1.03
SEMA3EO15041 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SEMA3EO15041 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEMA3EO15041 AC243591.1-201ENST00000452967 1364 ntBASIC21.51■■□□□ 1.03
SEMA3EO15041 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEMA3EO15041 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.51■■□□□ 1.03
SEMA3EO15041 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEMA3EO15041 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEMA3EO15041 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SEMA3EO15041 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SEMA3EO15041 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SEMA3EO15041 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.51■■□□□ 1.03
SEMA3EO15041 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.51■■□□□ 1.03
SEMA3EO15041 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SEMA3EO15041 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.51■■□□□ 1.03
SEMA3EO15041 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SEMA3EO15041 AL049840.3-201ENST00000602669 611 ntBASIC21.51■■□□□ 1.03
SEMA3EO15041 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.51■■□□□ 1.03
SEMA3EO15041 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
SEMA3EO15041 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEMA3EO15041 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.51■■□□□ 1.03
SEMA3EO15041 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.51■■□□□ 1.03
SEMA3EO15041 AL353593.2-201ENST00000602529 1483 ntBASIC21.51■■□□□ 1.03
SEMA3EO15041 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEMA3EO15041 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.51■■□□□ 1.03
SEMA3EO15041 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.51■■□□□ 1.03
SEMA3EO15041 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEMA3EO15041 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.5■■□□□ 1.03
SEMA3EO15041 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEMA3EO15041 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.5■■□□□ 1.03
SEMA3EO15041 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEMA3EO15041 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.5■■□□□ 1.03
SEMA3EO15041 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEMA3EO15041 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
SEMA3EO15041 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SEMA3EO15041 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.5■■□□□ 1.03
SEMA3EO15041 PRYP5-201ENST00000451909 266 ntBASIC21.5■■□□□ 1.03
SEMA3EO15041 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms