Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHD1O14646 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHD1O14646 AL499627.1-201ENST00000569373 2188 ntBASIC28.78■■■□□ 2.2
CHD1O14646 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHD1O14646 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC28.78■■■□□ 2.2
CHD1O14646 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
CHD1O14646 AL513480.1-201ENST00000451731 511 ntBASIC28.77■■■□□ 2.2
CHD1O14646 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC28.77■■■□□ 2.2
CHD1O14646 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHD1O14646 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC28.77■■■□□ 2.2
CHD1O14646 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC28.77■■■□□ 2.2
CHD1O14646 GATB-205ENST00000508611 605 ntTSL 2 BASIC28.77■■■□□ 2.2
CHD1O14646 TSFM-210ENST00000550559 897 ntTSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC28.77■■■□□ 2.2
CHD1O14646 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
CHD1O14646 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CHD1O14646 SNCG-201ENST00000348795 684 ntTSL 2 BASIC28.76■■■□□ 2.19
CHD1O14646 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC28.76■■■□□ 2.19
CHD1O14646 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC28.76■■■□□ 2.19
CHD1O14646 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC28.76■■■□□ 2.19
CHD1O14646 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
CHD1O14646 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC28.76■■■□□ 2.19
CHD1O14646 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CHD1O14646 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
CHD1O14646 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC28.76■■■□□ 2.19
CHD1O14646 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC28.76■■■□□ 2.19
CHD1O14646 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC28.75■■■□□ 2.19
CHD1O14646 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC28.75■■■□□ 2.19
CHD1O14646 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CHD1O14646 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
CHD1O14646 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC28.75■■■□□ 2.19
CHD1O14646 ACTL9-202ENST00000612068 1252 ntBASIC28.75■■■□□ 2.19
CHD1O14646 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHD1O14646 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
CHD1O14646 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC28.75■■■□□ 2.19
CHD1O14646 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
CHD1O14646 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHD1O14646 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CHD1O14646 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHD1O14646 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHD1O14646 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHD1O14646 RPL30-202ENST00000396070 440 ntTSL 2 BASIC28.74■■■□□ 2.19
CHD1O14646 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC28.74■■■□□ 2.19
CHD1O14646 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC28.74■■■□□ 2.19
CHD1O14646 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHD1O14646 AL049757.1-201ENST00000616842 1596 ntBASIC28.74■■■□□ 2.19
CHD1O14646 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
CHD1O14646 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC28.74■■■□□ 2.19
CHD1O14646 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC28.74■■■□□ 2.19
CHD1O14646 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC28.74■■■□□ 2.19
CHD1O14646 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC28.74■■■□□ 2.19
CHD1O14646 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC28.74■■■□□ 2.19
CHD1O14646 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC28.74■■■□□ 2.19
CHD1O14646 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CHD1O14646 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC28.74■■■□□ 2.19
CHD1O14646 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1O14646 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1O14646 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
CHD1O14646 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1O14646 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC28.73■■■□□ 2.19
CHD1O14646 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC28.73■■■□□ 2.19
CHD1O14646 IGHV3-42-201ENST00000520410 361 ntBASIC28.73■■■□□ 2.19
CHD1O14646 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1O14646 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC28.73■■■□□ 2.19
CHD1O14646 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1O14646 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1O14646 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC28.73■■■□□ 2.19
CHD1O14646 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
CHD1O14646 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
CHD1O14646 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC28.73■■■□□ 2.19
CHD1O14646 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1O14646 CYP51A1P2-201ENST00000419457 1499 ntBASIC28.73■■■□□ 2.19
CHD1O14646 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1O14646 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1O14646 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC28.72■■■□□ 2.19
CHD1O14646 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1O14646 AC079140.1-201ENST00000508039 487 ntBASIC28.72■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms