Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC026120.1-201ENST00000611536 926 ntBASIC18.97■□□□□ 0.63
SOX1O00570 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.97■□□□□ 0.63
SOX1O00570 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.97■□□□□ 0.63
SOX1O00570 AP001059.3-201ENST00000619053 235 ntBASIC18.97■□□□□ 0.63
SOX1O00570 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX1O00570 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.97■□□□□ 0.63
SOX1O00570 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX1O00570 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SOX1O00570 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX1O00570 IRX1P1-201ENST00000438849 1838 ntBASIC18.97■□□□□ 0.63
SOX1O00570 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SOX1O00570 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.96■□□□□ 0.63
SOX1O00570 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX1O00570 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOX1O00570 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.96■□□□□ 0.63
SOX1O00570 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SOX1O00570 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX1O00570 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SOX1O00570 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOX1O00570 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX1O00570 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOX1O00570 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX1O00570 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SOX1O00570 AL020989.1-201ENST00000422979 469 ntBASIC18.96■□□□□ 0.63
SOX1O00570 GPS2P2-201ENST00000430745 888 ntBASIC18.96■□□□□ 0.63
SOX1O00570 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.96■□□□□ 0.63
SOX1O00570 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.96■□□□□ 0.63
SOX1O00570 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.96■□□□□ 0.63
SOX1O00570 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.96■□□□□ 0.63
SOX1O00570 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.96■□□□□ 0.63
SOX1O00570 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.96■□□□□ 0.63
SOX1O00570 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.96■□□□□ 0.63
SOX1O00570 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.96■□□□□ 0.63
SOX1O00570 CU639417.3-201ENST00000624240 1404 ntBASIC18.96■□□□□ 0.63
SOX1O00570 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.96■□□□□ 0.63
SOX1O00570 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SOX1O00570 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.96■□□□□ 0.63
SOX1O00570 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SOX1O00570 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.96■□□□□ 0.63
SOX1O00570 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX1O00570 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX1O00570 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
SOX1O00570 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SOX1O00570 SDHAP2-201ENST00000455183 2001 ntBASIC18.95■□□□□ 0.62
SOX1O00570 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX1O00570 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX1O00570 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX1O00570 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX1O00570 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX1O00570 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SOX1O00570 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SOX1O00570 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.95■□□□□ 0.62
SOX1O00570 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SOX1O00570 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.95■□□□□ 0.62
SOX1O00570 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.95■□□□□ 0.62
SOX1O00570 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.95■□□□□ 0.62
SOX1O00570 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.95■□□□□ 0.62
SOX1O00570 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX1O00570 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX1O00570 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SOX1O00570 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SOX1O00570 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX1O00570 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SOX1O00570 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX1O00570 AC073314.1-201ENST00000568729 2216 ntBASIC18.94■□□□□ 0.62
SOX1O00570 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX1O00570 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SOX1O00570 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SOX1O00570 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SOX1O00570 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX1O00570 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX1O00570 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.94■□□□□ 0.62
SOX1O00570 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SOX1O00570 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.94■□□□□ 0.62
SOX1O00570 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SOX1O00570 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SOX1O00570 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.94■□□□□ 0.62
SOX1O00570 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX1O00570 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SOX1O00570 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SOX1O00570 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.94■□□□□ 0.62
SOX1O00570 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.94■□□□□ 0.62
SOX1O00570 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.94■□□□□ 0.62
SOX1O00570 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
SOX1O00570 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.94■□□□□ 0.62
SOX1O00570 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOX1O00570 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.93■□□□□ 0.62
SOX1O00570 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SOX1O00570 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.93■□□□□ 0.62
SOX1O00570 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX1O00570 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOX1O00570 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SOX1O00570 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX1O00570 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX1O00570 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX1O00570 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX1O00570 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOX1O00570 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.93■□□□□ 0.62
SOX1O00570 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX1O00570 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms