Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 KRT8P47-201ENST00000604727 1398 ntBASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MRPL3P1-201ENST00000400109 1033 ntBASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 KRT18P67-201ENST00000432816 1264 ntBASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC073648.2-201ENST00000510116 352 ntBASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC079776.4-201ENST00000511039 504 ntBASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AL773604.1-201ENST00000617417 272 ntBASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AP005117.1-201ENST00000584346 1413 ntBASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 FGFR3P6-201ENST00000457012 610 ntBASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.91■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.91■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.91■□□□□ 0.46
C1QTNF3-AMACRE9PGA6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms