Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 AC125807.1-201ENST00000483097 614 ntBASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 AP001059.3-201ENST00000619053 235 ntBASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 AL390754.1-201ENST00000619088 582 ntBASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TMEM88BA6NKF7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 AL512638.1-201ENST00000457493 794 ntBASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 AL606495.2-201ENST00000605867 535 ntBASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM88BA6NKF7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 COX5BP8-201ENST00000416911 349 ntBASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 ARSEP1-201ENST00000420443 635 ntBASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 IGHV3-42-201ENST00000520410 361 ntBASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 AC140878.1-201ENST00000565277 250 ntBASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 AIRN-201ENST00000601203 4374 ntBASIC20.69■□□□□ 0.9
TMEM88BA6NKF7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 KLF4P1-201ENST00000412782 1185 ntBASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 TREML5P-201ENST00000421694 576 ntBASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 SPDYE11-202ENST00000450699 704 ntBASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 KRT8P48-201ENST00000515599 1220 ntBASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 FAM86C2P-203ENST00000528684 1004 ntBASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 SPDYE9P-201ENST00000570642 692 ntBASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 SPDYE10P-202ENST00000612005 668 ntBASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 SPDYE8P-202ENST00000612377 668 ntBASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 AL662799.1-202ENST00000614205 422 ntBASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 AL137060.1-201ENST00000618151 2648 ntBASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM88BA6NKF7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TMEM88BA6NKF7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms