Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 KRT18P55-202ENST00000578578 1546 ntBASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 PCDHA12-202ENST00000613593 2588 ntBASIC16.84■□□□□ 0.29
PRAMEF25A6NGN4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRAMEF25A6NGN4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PRAMEF25A6NGN4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRAMEF25A6NGN4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 AL024508.2-201ENST00000607749 1894 ntBASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 HYMAI.1-201ENST00000620949 238 ntBASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF25A6NGN4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AC009053.2-201ENST00000563701 2365 ntBASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AL391807.1-203ENST00000604392 2365 ntBASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 HBZP1-201ENST00000354915 429 ntBASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AL031133.1-201ENST00000406807 723 ntBASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AC083849.1-201ENST00000615227 514 ntBASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF25A6NGN4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 HLA-F-220ENST00000434407 884 ntBASIC16.81■□□□□ 0.28
PRAMEF25A6NGN4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms