Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 NKAPP1-205ENST00000585790 367 ntBASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 AL139288.1-201ENST00000623748 933 ntBASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 HLA-J-201ENST00000462773 1622 ntBASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TBC1D3BA6NDS4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 CROCCP3-202ENST00000420820 1947 ntBASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 AC022898.2-201ENST00000616822 1312 ntBASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TBC1D3BA6NDS4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 AC073592.3-201ENST00000625118 1834 ntBASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 POLD2P1-201ENST00000511220 997 ntBASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 TERC-201ENST00000602385 541 ntBASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 AP000867.4-201ENST00000641616 219 ntBASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.16■□□□□ 0.5
TBC1D3BA6NDS4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 AC096633.1-201ENST00000422446 749 ntBASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 MTDHP4-201ENST00000600287 670 ntBASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TBC1D3BA6NDS4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms