Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 AP000692.2-201ENST00000608391 879 ntBASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 AC022898.2-201ENST00000616822 1312 ntBASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 B3GAT3P1-201ENST00000471720 806 ntBASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 AL137784.2-201ENST00000607332 1000 ntBASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 AC124016.1-201ENST00000609552 612 ntBASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV3S1A0A5B6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 KRT18P23-201ENST00000435622 1283 ntBASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 AP003097.1-201ENST00000530657 1135 ntBASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 MIR4674-201ENST00000582457 87 ntBASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 MIR6786-201ENST00000616843 113 ntBASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 AL603756.1-201ENST00000606511 2163 ntBASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV3S1A0A5B6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 AC096733.2-201ENST00000609937 1394 ntBASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV3S1A0A5B6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms