Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.26□□□□□ -0.61
IGKV3D-7A0A0C4DH55 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AC007322.3-201ENST00000426526 701 ntBASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AC144831.1-201ENST00000573312 2656 ntBASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms