Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 AL138966.2-201ENST00000621997 464 ntBASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 AC005332.8-201ENST00000622750 2735 ntBASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
TRGV1A0A0A0MS02 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 LINC01023-201ENST00000606054 436 ntBASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 NOC2LP2-201ENST00000407594 1944 ntBASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV1A0A0A0MS02 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms