Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 MTDHP5-201ENST00000598980 586 ntBASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 KRT18P27-201ENST00000427733 1299 ntBASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 PRYP5-201ENST00000451909 266 ntBASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 AC134684.3-201ENST00000641758 218 ntBASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC187A0A096LP49 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 AC023274.1-201ENST00000418278 595 ntBASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 AC108751.1-201ENST00000490852 363 ntBASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 AC136632.2-201ENST00000512891 861 ntBASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 AC064836.3-201ENST00000607928 673 ntBASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 SIGLEC16-201ENST00000599858 1437 ntBASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.93■□□□□ 0.3
CCDC187A0A096LP49 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms