Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DRB4X5D2U9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 AL441883.1-201ENST00000566170 1045 ntBASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 AC139887.4-201ENST00000607877 719 ntBASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 GNAS-203ENST00000306120 1878 ntBASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HLA-DRB4X5D2U9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 AL024508.2-201ENST00000607749 1894 ntBASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 TNRC18P3-201ENST00000441896 2691 ntBASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 AC117947.1-201ENST00000427448 529 ntBASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 RASA4DP-201ENST00000460726 1199 ntBASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 AC011558.1-201ENST00000623459 338 ntBASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DRB4X5D2U9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms