Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ARFGEF1Q9Y6D6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 BCAR1-209ENST00000546196 1340 ntBASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 AL032819.2-201ENST00000624543 2162 ntBASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 AL020989.1-201ENST00000422979 469 ntBASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
ARFGEF1Q9Y6D6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 MIR661-201ENST00000384842 89 ntBASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 MEIS3P1-201ENST00000495167 958 ntBASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 AC004835.2-201ENST00000603762 682 ntBASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 AC105339.1-204ENST00000636249 355 ntBASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ARFGEF1Q9Y6D6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
ARFGEF1Q9Y6D6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
ARFGEF1Q9Y6D6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 AC103564.2-201ENST00000432853 1299 ntBASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 LINC00628-201ENST00000628516 1289 ntBASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.76■■□□□ 1.07
ARFGEF1Q9Y6D6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 AL161938.1-201ENST00000569833 2180 ntBASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 AC236430.1-201ENST00000402231 743 ntBASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 AL627223.1-201ENST00000416693 442 ntBASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.75■■□□□ 1.07
ARFGEF1Q9Y6D6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms