Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 BCAR1-209ENST00000546196 1340 ntBASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 KRT8P47-201ENST00000604727 1398 ntBASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 AC015922.1-201ENST00000421102 1152 ntBASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 ACTG1P14-201ENST00000446382 1122 ntBASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 KRT19P2-202ENST00000557173 1012 ntBASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 AL513210.1-201ENST00000629608 234 ntBASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 AC093484.2-201ENST00000580996 2166 ntBASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PTCH2Q9Y6C5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 AC109322.1-201ENST00000524499 1264 ntBASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 AC073592.5-201ENST00000624854 528 ntBASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTCH2Q9Y6C5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 AC004461.1-201ENST00000412461 403 ntBASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 AC122714.2-201ENST00000502787 707 ntBASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 AC025678.2-201ENST00000562061 970 ntBASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PTCH2Q9Y6C5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.14■□□□□ 0.82
PTCH2Q9Y6C5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.14■□□□□ 0.81
PTCH2Q9Y6C5 AC063926.2-201ENST00000623766 1308 ntBASIC20.14■□□□□ 0.81
PTCH2Q9Y6C5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCH2Q9Y6C5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTCH2Q9Y6C5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PTCH2Q9Y6C5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.14■□□□□ 0.81
PTCH2Q9Y6C5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms