Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPBQ9Y5S2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 RHOQP3-201ENST00000437982 621 ntBASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPBQ9Y5S2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 COX5BP2-201ENST00000392354 334 ntBASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 VN2R19P-201ENST00000442399 1052 ntBASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 OR7E47P-204ENST00000575924 449 ntBASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC26.92■■□□□ 1.9
CDC42BPBQ9Y5S2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 CALY-203ENST00000368558 825 ntTSL 5 BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 PRSS29P-201ENST00000440800 595 ntBASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 MIR3197-201ENST00000582241 73 ntBASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPBQ9Y5S2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 STOM-202ENST00000347359 870 ntTSL 2 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 CD63-210ENST00000550776 870 ntTSL 5 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 AC018445.3-201ENST00000624177 1945 ntBASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 DUTP2-201ENST00000519164 463 ntBASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC26.9■■□□□ 1.9
CDC42BPBQ9Y5S2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms