Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
NINLQ9Y2I6 AL353593.2-201ENST00000602529 1483 ntBASIC24.46■■□□□ 1.51
NINLQ9Y2I6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC24.45■■□□□ 1.51
NINLQ9Y2I6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
NINLQ9Y2I6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC24.45■■□□□ 1.51
NINLQ9Y2I6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
NINLQ9Y2I6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 BX842568.4-201ENST00000421222 227 ntBASIC24.45■■□□□ 1.5
NINLQ9Y2I6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 AC243591.1-201ENST00000452967 1364 ntBASIC24.45■■□□□ 1.5
NINLQ9Y2I6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NINLQ9Y2I6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
NINLQ9Y2I6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 HNRNPDP1-201ENST00000439535 754 ntBASIC24.43■■□□□ 1.5
NINLQ9Y2I6 AL139424.1-201ENST00000607572 797 ntBASIC24.43■■□□□ 1.5
NINLQ9Y2I6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 IL9RP2-201ENST00000423948 1312 ntBASIC24.43■■□□□ 1.5
NINLQ9Y2I6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NINLQ9Y2I6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 SPDYE21P-201ENST00000413323 827 ntBASIC24.42■■□□□ 1.5
NINLQ9Y2I6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms