Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMC3Q9UQE7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMC3Q9UQE7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.1■□□□□ 0.97
SMC3Q9UQE7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 MIR3917-201ENST00000580971 93 ntBASIC21.1■□□□□ 0.97
SMC3Q9UQE7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 AC092865.7-201ENST00000641832 219 ntBASIC21.1■□□□□ 0.97
SMC3Q9UQE7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 AC012313.1-201ENST00000593393 3059 ntBASIC21.1■□□□□ 0.97
SMC3Q9UQE7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
SMC3Q9UQE7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 AC106820.2-201ENST00000563775 3264 ntBASIC21.09■□□□□ 0.97
SMC3Q9UQE7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 ECEL1P2-202ENST00000465689 757 ntBASIC21.09■□□□□ 0.97
SMC3Q9UQE7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 AL512604.3-201ENST00000569583 964 ntBASIC21.09■□□□□ 0.97
SMC3Q9UQE7 MIR4497-201ENST00000583208 89 ntBASIC21.09■□□□□ 0.97
SMC3Q9UQE7 FAM87A-204ENST00000613235 858 ntBASIC21.09■□□□□ 0.97
SMC3Q9UQE7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMC3Q9UQE7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms