Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 FAM58CP-201ENST00000435741 640 ntBASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 AC069262.1-201ENST00000539058 672 ntBASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 AC096734.2-201ENST00000562054 433 ntBASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 PKD1P6-201ENST00000343738 4769 ntBASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.64■■□□□ 1.05
ZC3H4Q9UPT8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 AC006504.4-201ENST00000592118 1568 ntBASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 DDX43P3-201ENST00000441064 443 ntBASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 FAM86GP-201ENST00000448322 971 ntBASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.63■■□□□ 1.05
ZC3H4Q9UPT8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 RPS15P9-201ENST00000494093 319 ntBASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 KRT19P2-202ENST00000557173 1012 ntBASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 AC010507.1-201ENST00000633895 436 ntBASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3H4Q9UPT8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 AC004461.1-201ENST00000412461 403 ntBASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 AC023141.5-201ENST00000458585 616 ntBASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 AC067863.1-201ENST00000494933 530 ntBASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.61■■□□□ 1.05
ZC3H4Q9UPT8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms