Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 NSUN5P1-202ENST00000421140 1535 ntBASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 NSUN5P2-203ENST00000457352 1529 ntBASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 KRT89P-201ENST00000620027 1478 ntBASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 MIR574-201ENST00000385209 96 ntBASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 KRT18P13-201ENST00000400056 1290 ntBASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 AC024563.2-201ENST00000603282 481 ntBASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 AL773604.1-201ENST00000617417 272 ntBASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 AC124864.1-201ENST00000623408 392 ntBASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 AC008764.6-201ENST00000595909 2069 ntBASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDZRN3Q9UPQ7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.14■■□□□ 1.3
PDZRN3Q9UPQ7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PDZRN3Q9UPQ7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.14■■□□□ 1.3
PDZRN3Q9UPQ7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
PDZRN3Q9UPQ7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.14■■□□□ 1.3
PDZRN3Q9UPQ7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 RNA5SP419-201ENST00000515908 135 ntBASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 AF238378.1-201ENST00000526806 358 ntBASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 AF228730.7-201ENST00000641842 219 ntBASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 MYLKP1-201ENST00000509077 1580 ntBASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.14■■□□□ 1.29
PDZRN3Q9UPQ7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 IL9RP2-201ENST00000423948 1312 ntBASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PDZRN3Q9UPQ7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 AC009065.1-201ENST00000564055 1225 ntBASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.12■■□□□ 1.29
PDZRN3Q9UPQ7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms